Analysis of interatomic Contacts of Structural Units in PDB entry:
7BV1

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7BV1 entry

There are 4 chains in PDB entry 7BV1 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	VAL 31	GLN 932
B	ASP 78	ALA 191
C	LYS 2	GLY 64
D	SER 85	LEU 189

There are 51 helices in PDB entry 7BV1. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	84	90	Right-handed 310
Helix 2	AA2	A	123	133	Right-handed alpha
Helix 3	AA3	A	139	149	Right-handed alpha
Helix 4	AA4	A	153	159	Right-handed 310
Helix 5	AA5	A	170	177	Right-handed alpha
Helix 6	AA6	A	178	200	Right-handed alpha
Helix 7	AA7	A	206	210	Right-handed 310
Helix 8	AA8	A	234	242	Right-handed alpha
Helix 9	AA9	A	242	248	Right-handed alpha
Helix 10	AB1	A	249	256	Right-handed 310
Helix 11	AB2	A	275	287	Right-handed alpha
Helix 12	AB3	A	297	301	Right-handed 310
Helix 13	AB4	A	303	318	Right-handed alpha
Helix 14	AB5	A	322	326	Right-handed 310
Helix 15	AB6	A	367	375	Right-handed alpha
Helix 16	AB7	A	377	385	Right-handed alpha
Helix 17	AB8	A	416	426	Right-handed alpha
Helix 18	AB9	A	447	454	Right-handed alpha
Helix 19	AC1	A	455	459	Right-handed 310
Helix 20	AC2	A	465	480	Right-handed alpha
Helix 21	AC3	A	511	519	Right-handed alpha
Helix 22	AC4	A	520	534	Right-handed alpha
Helix 23	AC5	A	561	580	Right-handed alpha
Helix 24	AC6	A	596	607	Right-handed alpha
Helix 25	AC7	A	621	626	Right-handed alpha
Helix 26	AC8	A	627	639	Right-handed alpha
Helix 27	AC9	A	647	663	Right-handed alpha
Helix 28	AD1	A	686	709	Right-handed alpha
Helix 29	AD2	A	717	733	Right-handed alpha
Helix 30	AD3	A	738	752	Right-handed alpha
Helix 31	AD4	A	768	772	Right-handed alpha
Helix 32	AD5	A	778	791	Right-handed alpha
Helix 33	AD6	A	833	842	Right-handed alpha
Helix 34	AD7	A	852	867	Right-handed alpha
Helix 35	AD8	A	868	872	Right-handed 310
Helix 36	AD9	A	874	895	Right-handed alpha
Helix 37	AE1	A	918	923	Right-handed alpha
Helix 38	AE2	A	924	926	Right-handed 310
Helix 39	AE3	B	79	97	Right-handed alpha
Helix 40	AE4	B	101	108	Right-handed alpha
Helix 41	AE5	B	110	114	Right-handed 310
Helix 42	AE6	B	119	125	Right-handed alpha
Helix 43	AE7	B	134	142	Right-handed alpha
Helix 44	AE8	B	176	180	Right-handed 310
Helix 45	AE9	C	3	20	Right-handed alpha
Helix 46	AF1	C	21	25	Right-handed 310
Helix 47	AF2	C	26	40	Right-handed alpha
Helix 48	AF3	C	44	61	Right-handed alpha
Helix 49	AF4	D	87	99	Right-handed alpha
Helix 50	AF5	D	100	112	Right-handed alpha
Helix 51	AF6	D	137	141	Right-handed 310

There are 11 sheets in PDB entry 7BV1. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	33	38	first strand
Strand 2	A	43	48	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	223	224	first strand
Strand 2	A	201	204	anti-parallel
Strand 3	A	231	233	parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	352	354	first strand
Strand 2	A	338	348	anti-parallel
Strand 3	A	327	335	anti-parallel
Strand 4	A	362	363	parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	352	354	first strand
Strand 2	A	338	348	anti-parallel
Strand 3	A	327	335	anti-parallel
Strand 4	B	115	116	anti-parallel

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There are 10 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	556	559	first strand
Strand 2	A	539	544	anti-parallel
Strand 3	A	666	669	parallel
Strand 4	A	672	675	anti-parallel
Strand 5	A	397	400	anti-parallel
Strand 6	A	386	390	anti-parallel
Strand 7	B	127	132	parallel
Strand 8	B	184	190	anti-parallel
Strand 9	B	152	160	anti-parallel
Strand 10	B	146	149	anti-parallel

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There are 10 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	556	559	first strand
Strand 2	A	539	544	anti-parallel
Strand 3	A	666	669	parallel
Strand 4	A	672	675	anti-parallel
Strand 5	A	397	400	anti-parallel
Strand 6	A	386	390	anti-parallel
Strand 7	B	127	132	parallel
Strand 8	B	184	190	anti-parallel
Strand 9	B	152	160	anti-parallel
Strand 10	B	166	167	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	414	415	first strand
Strand 2	A	843	844	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	753	757	first strand
Strand 2	A	762	767	anti-parallel
Strand 3	A	612	616	anti-parallel
Strand 4	A	800	802	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	816	822	first strand
Strand 2	A	825	831	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	131	132	first strand
Strand 2	D	184	185	anti-parallel
Strand 3	D	160	161	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	146	149	first strand
Strand 2	D	152	156	anti-parallel
Strand 3	D	188	189	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7BV1

Analysis of interatomic Contacts of Structural Units in PDB entry:
7BV1