Analysis of interatomic Contacts of Structural Units in PDB entry:
7BVA


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7BVA entry

There are 2 chains in PDB entry 7BVA (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 4ASN 483
B
 GLN 5ASN 483
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 42 helices in PDB entry 7BVA. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
7 10Right-handed 310
Helix 2
AA2
A
20 33Right-handed alpha
Helix 3
AA3
A
45 54Right-handed alpha
Helix 4
AA4
A
63 69Right-handed 310
Helix 5
AA5
A
88 98Right-handed alpha
Helix 6
AA6
A
104 113Right-handed alpha
Helix 7
AA7
A
125 140Right-handed alpha
Helix 8
AA8
A
176 181Right-handed 310
Helix 9
AA9
A
195 199Right-handed 310
Helix 10
AB1
A
201 215Right-handed alpha
Helix 11
AB2
A
228 240Right-handed alpha
Helix 12
AB3
A
295 312Right-handed alpha
Helix 13
AB4
A
315 325Right-handed alpha
Helix 14
AB5
A
341 345Right-handed 310
Helix 15
AB6
A
355 371Right-handed alpha
Helix 16
AB7
A
386 402Right-handed alpha
Helix 17
AB8
A
424 430Right-handed alpha
Helix 18
AB9
A
441 443Right-handed 310
Helix 19
AC1
A
444 453Right-handed alpha
Helix 20
AC2
A
465 468Right-handed 310
Helix 21
AC3
A
469 482Right-handed alpha
Helix 22
AC4
B
7 10Right-handed 310
Helix 23
AC5
B
20 33Right-handed alpha
Helix 24
AC6
B
45 54Right-handed alpha
Helix 25
AC7
B
63 69Right-handed 310
Helix 26
AC8
B
88 98Right-handed alpha
Helix 27
AC9
B
104 112Right-handed alpha
Helix 28
AD1
B
125 140Right-handed alpha
Helix 29
AD2
B
176 181Right-handed 310
Helix 30
AD3
B
195 199Right-handed 310
Helix 31
AD4
B
201 215Right-handed alpha
Helix 32
AD5
B
228 240Right-handed alpha
Helix 33
AD6
B
295 312Right-handed alpha
Helix 34
AD7
B
315 325Right-handed alpha
Helix 35
AD8
B
341 345Right-handed 310
Helix 36
AD9
B
355 372Right-handed alpha
Helix 37
AE1
B
386 402Right-handed alpha
Helix 38
AE2
B
424 430Right-handed alpha
Helix 39
AE3
B
441 443Right-handed 310
Helix 40
AE4
B
444 453Right-handed alpha
Helix 41
AE5
B
465 468Right-handed 310
Helix 42
AE6
B
469 482Right-handed alpha
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There are 6 sheets in PDB entry 7BVA. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
57 60first strand
Strand 2
A
36 41parallel
Strand 3
A
12 16parallel
Strand 4
A
76 79parallel
Strand 5
A
101 103parallel
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There are 10 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
153 160first strand
Strand 2
A
145 150anti-parallel
Strand 3
A
166 170parallel
Strand 4
A
116 121parallel
Strand 5
A
185 188parallel
Strand 6
A
221 225parallel
Strand 7
A
244 249parallel
Strand 8
A
256 265parallel
Strand 9
A
270 276anti-parallel
Strand 10
A
286 291anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
334 339first strand
Strand 2
A
346 351anti-parallel
Strand 3
A
458 463parallel
Strand 4
A
378 383parallel
Strand 5
A
406 409parallel
Strand 6
A
436 438parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
57 60first strand
Strand 2
B
36 41parallel
Strand 3
B
12 16parallel
Strand 4
B
76 79parallel
Strand 5
B
101 103parallel
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There are 10 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
153 160first strand
Strand 2
B
145 150anti-parallel
Strand 3
B
166 170parallel
Strand 4
B
116 121parallel
Strand 5
B
185 188parallel
Strand 6
B
221 225parallel
Strand 7
B
244 249parallel
Strand 8
B
258 265parallel
Strand 9
B
270 275anti-parallel
Strand 10
B
287 291anti-parallel
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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
334 339first strand
Strand 2
B
346 351anti-parallel
Strand 3
B
458 463parallel
Strand 4
B
378 383parallel
Strand 5
B
406 409parallel
Strand 6
B
436 438parallel
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