Analysis of interatomic Contacts of Structural Units in PDB entry:
7BVB


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7BVB entry

There are 2 chains in PDB entry 7BVB (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 5ASN 483
B
 GLN 5ASN 483
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 41 helices in PDB entry 7BVB. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
7 10Right-handed 310
Helix 2
AA2
A
20 33Right-handed alpha
Helix 3
AA3
A
45 54Right-handed alpha
Helix 4
AA4
A
63 69Right-handed 310
Helix 5
AA5
A
88 98Right-handed alpha
Helix 6
AA6
A
104 112Right-handed alpha
Helix 7
AA7
A
125 140Right-handed alpha
Helix 8
AA8
A
177 181Right-handed 310
Helix 9
AA9
A
201 215Right-handed alpha
Helix 10
AB1
A
228 241Right-handed alpha
Helix 11
AB2
A
296 312Right-handed alpha
Helix 12
AB3
A
315 324Right-handed alpha
Helix 13
AB4
A
355 372Right-handed alpha
Helix 14
AB5
A
386 393Right-handed alpha
Helix 15
AB6
A
393 402Right-handed alpha
Helix 16
AB7
A
425 430Right-handed alpha
Helix 17
AB8
A
441 443Right-handed 310
Helix 18
AB9
A
444 452Right-handed alpha
Helix 19
AC1
A
465 468Right-handed 310
Helix 20
AC2
A
469 481Right-handed alpha
Helix 21
AC3
B
7 10Right-handed 310
Helix 22
AC4
B
20 33Right-handed alpha
Helix 23
AC5
B
45 55Right-handed alpha
Helix 24
AC6
B
63 69Right-handed 310
Helix 25
AC7
B
88 98Right-handed alpha
Helix 26
AC8
B
103 112Right-handed alpha
Helix 27
AC9
B
125 140Right-handed alpha
Helix 28
AD1
B
176 181Right-handed 310
Helix 29
AD2
B
208 216Right-handed alpha
Helix 30
AD3
B
228 241Right-handed alpha
Helix 31
AD4
B
295 311Right-handed alpha
Helix 32
AD5
B
315 325Right-handed alpha
Helix 33
AD6
B
341 345Right-handed 310
Helix 34
AD7
B
355 373Right-handed alpha
Helix 35
AD8
B
386 393Right-handed alpha
Helix 36
AD9
B
393 402Right-handed alpha
Helix 37
AE1
B
424 430Right-handed alpha
Helix 38
AE2
B
441 443Right-handed 310
Helix 39
AE3
B
444 453Right-handed alpha
Helix 40
AE4
B
465 468Right-handed 310
Helix 41
AE5
B
469 481Right-handed alpha
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There are 6 sheets in PDB entry 7BVB. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
57 60first strand
Strand 2
A
36 41parallel
Strand 3
A
12 16parallel
Strand 4
A
76 79parallel
Strand 5
A
101 103parallel
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There are 10 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
158 160first strand
Strand 2
A
145 148anti-parallel
Strand 3
A
166 170parallel
Strand 4
A
116 121parallel
Strand 5
A
185 188parallel
Strand 6
A
221 225parallel
Strand 7
A
244 249parallel
Strand 8
A
256 265parallel
Strand 9
A
270 276anti-parallel
Strand 10
A
287 291anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
334 339first strand
Strand 2
A
346 351anti-parallel
Strand 3
A
458 463parallel
Strand 4
A
378 383parallel
Strand 5
A
406 409parallel
Strand 6
A
436 438parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
56 60first strand
Strand 2
B
36 41parallel
Strand 3
B
12 16parallel
Strand 4
B
76 79parallel
Strand 5
B
101 102parallel
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There are 10 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
153 160first strand
Strand 2
B
145 150anti-parallel
Strand 3
B
166 170parallel
Strand 4
B
116 121parallel
Strand 5
B
185 188parallel
Strand 6
B
221 225parallel
Strand 7
B
244 249parallel
Strand 8
B
256 264parallel
Strand 9
B
270 276anti-parallel
Strand 10
B
286 291anti-parallel
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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
334 339first strand
Strand 2
B
346 350anti-parallel
Strand 3
B
458 462parallel
Strand 4
B
378 382parallel
Strand 5
B
406 409parallel
Strand 6
B
436 438parallel
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