Analysis of interatomic Contacts of Structural Units in PDB entry:
7BVE

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7BVE entry

There are 2 chains in PDB entry 7BVE (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASN 11	HIS 1075
B	ASN 11	SER 290

There are 86 helices in PDB entry 7BVE. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	13	33	Right-handed alpha
Helix 2	AA2	A	34	36	Right-handed 310
Helix 3	AA3	A	74	81	Right-handed 310
Helix 4	AA4	A	130	134	Right-handed alpha
Helix 5	AA5	A	213	239	Right-handed alpha
Helix 6	AA6	A	257	273	Right-handed alpha
Helix 7	AA7	A	280	294	Right-handed alpha
Helix 8	AA8	A	301	305	Right-handed 310
Helix 9	AA9	A	313	321	Right-handed alpha
Helix 10	AB1	A	326	331	Right-handed alpha
Helix 11	AB2	A	331	349	Right-handed alpha
Helix 12	AB3	A	360	379	Right-handed alpha
Helix 13	AB4	A	384	406	Right-handed alpha
Helix 14	AB5	A	408	423	Right-handed alpha
Helix 15	AB6	A	425	430	Right-handed 310
Helix 16	AB7	A	431	437	Right-handed alpha
Helix 17	AB8	A	439	450	Right-handed alpha
Helix 18	AB9	A	455	468	Right-handed alpha
Helix 19	AC1	A	469	474	Right-handed alpha
Helix 20	AC2	A	478	493	Right-handed alpha
Helix 21	AC3	A	497	500	Right-handed 310
Helix 22	AC4	A	501	509	Right-handed alpha
Helix 23	AC5	A	516	540	Right-handed alpha
Helix 24	AC6	A	547	565	Right-handed alpha
Helix 25	AC7	A	566	568	Right-handed 310
Helix 26	AC8	A	573	580	Right-handed 310
Helix 27	AC9	A	581	593	Right-handed alpha
Helix 28	AD1	A	601	620	Right-handed alpha
Helix 29	AD2	A	646	669	Right-handed alpha
Helix 30	AD3	A	680	686	Right-handed alpha
Helix 31	AD4	A	687	711	Right-handed alpha
Helix 32	AD5	A	716	724	Right-handed alpha
Helix 33	AD6	A	725	727	Right-handed 310
Helix 34	AD7	A	730	734	Right-handed 310
Helix 35	AD8	A	882	888	Right-handed alpha
Helix 36	AD9	A	951	955	Right-handed alpha
Helix 37	AE1	A	994	1002	Right-handed alpha
Helix 38	AE2	A	1003	1005	Right-handed 310
Helix 39	AE3	A	1011	1014	Right-handed 310
Helix 40	AE4	A	1015	1019	Right-handed alpha
Helix 41	AE5	B	12	33	Right-handed alpha
Helix 42	AE6	B	34	36	Right-handed 310
Helix 43	AE7	B	74	81	Right-handed 310
Helix 44	AE8	B	119	123	Right-handed 310
Helix 45	AE9	B	130	134	Right-handed alpha
Helix 46	AF1	B	213	239	Right-handed alpha
Helix 47	AF2	B	257	273	Right-handed alpha
Helix 48	AF3	B	280	294	Right-handed alpha
Helix 49	AF4	B	301	305	Right-handed 310
Helix 50	AF5	B	313	321	Right-handed alpha
Helix 51	AF6	B	326	348	Right-handed alpha
Helix 52	AF7	B	361	379	Right-handed alpha
Helix 53	AF8	B	384	406	Right-handed alpha
Helix 54	AF9	B	408	423	Right-handed alpha
Helix 55	AG1	B	425	430	Right-handed 310
Helix 56	AG2	B	431	438	Right-handed alpha
Helix 57	AG3	B	439	450	Right-handed alpha
Helix 58	AG4	B	455	468	Right-handed alpha
Helix 59	AG5	B	469	474	Right-handed alpha
Helix 60	AG6	B	478	493	Right-handed alpha
Helix 61	AG7	B	497	500	Right-handed 310
Helix 62	AG8	B	501	509	Right-handed alpha
Helix 63	AG9	B	516	540	Right-handed alpha
Helix 64	AH1	B	547	565	Right-handed alpha
Helix 65	AH2	B	566	568	Right-handed 310
Helix 66	AH3	B	573	580	Right-handed 310
Helix 67	AH4	B	581	593	Right-handed alpha
Helix 68	AH5	B	601	620	Right-handed alpha
Helix 69	AH6	B	646	669	Right-handed alpha
Helix 70	AH7	B	679	686	Right-handed alpha
Helix 71	AH8	B	687	711	Right-handed alpha
Helix 72	AH9	B	716	724	Right-handed alpha
Helix 73	AI1	B	725	727	Right-handed 310
Helix 74	AI2	B	730	734	Right-handed 310
Helix 75	AI3	B	882	888	Right-handed alpha
Helix 76	AI4	B	951	955	Right-handed alpha
Helix 77	AI5	B	994	1002	Right-handed alpha
Helix 78	AI6	B	1003	1005	Right-handed 310
Helix 79	AI7	B	1011	1014	Right-handed 310
Helix 80	AI8	B	1015	1019	Right-handed alpha
Helix 81	AI9	C	4	20	Right-handed alpha
Helix 82	AJ1	C	40	55	Right-handed alpha
Helix 83	AJ2	C	69	81	Right-handed alpha
Helix 84	AJ3	D	4	20	Right-handed alpha
Helix 85	AJ4	D	40	55	Right-handed alpha
Helix 86	AJ5	D	69	81	Right-handed alpha

There are 19 sheets in PDB entry 7BVE. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	38	40	first strand
Strand 2	A	1060	1062	anti-parallel

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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	171	175	first strand
Strand 2	A	149	155	anti-parallel
Strand 3	A	140	145	anti-parallel
Strand 4	A	67	71	anti-parallel
Strand 5	A	201	203	anti-parallel
Strand 6	A	43	46	anti-parallel
Strand 7	A	1056	1057	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	56	57	first strand
Strand 2	A	1051	1052	parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	90	93	first strand
Strand 2	A	107	112	anti-parallel
Strand 3	A	115	120	anti-parallel
Strand 4	A	123	129	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	949	950	first strand
Strand 2	A	736	738	anti-parallel
Strand 3	A	1027	1029	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	748	749	first strand
Strand 2	A	851	852	anti-parallel
Strand 3	A	922	923	anti-parallel

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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	762	764	first strand
Strand 2	A	845	847	anti-parallel
Strand 3	A	925	928	anti-parallel
Strand 4	A	877	878	anti-parallel
Strand 5	A	895	896	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	833	834	first strand
Strand 2	A	939	940	anti-parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	862	867	first strand
Strand 2	A	907	912	anti-parallel
Strand 3	A	898	899	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	961	963	first strand
Strand 2	A	989	992	parallel
Strand 3	A	1039	1045	anti-parallel
Strand 4	A	1020	1025	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	38	40	first strand
Strand 2	B	1060	1062	anti-parallel

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There are 7 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	171	175	first strand
Strand 2	B	149	155	anti-parallel
Strand 3	B	140	145	anti-parallel
Strand 4	B	67	71	anti-parallel
Strand 5	B	201	203	anti-parallel
Strand 6	B	43	46	anti-parallel
Strand 7	B	1056	1057	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	56	57	first strand
Strand 2	B	1051	1052	parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	90	93	first strand
Strand 2	B	108	112	anti-parallel
Strand 3	B	115	117	anti-parallel
Strand 4	B	127	129	anti-parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	949	950	first strand
Strand 2	B	736	738	anti-parallel
Strand 3	B	1027	1029	anti-parallel

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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	748	749	first strand
Strand 2	B	851	852	anti-parallel
Strand 3	B	922	923	anti-parallel

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There are 5 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	762	764	first strand
Strand 2	B	844	847	anti-parallel
Strand 3	B	925	929	anti-parallel
Strand 4	B	876	878	anti-parallel
Strand 5	B	895	896	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	862	867	first strand
Strand 2	B	907	912	anti-parallel

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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	961	963	first strand
Strand 2	B	989	992	parallel
Strand 3	B	1039	1045	anti-parallel
Strand 4	B	1020	1025	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7BVE

Analysis of interatomic Contacts of Structural Units in PDB entry:
7BVE