Analysis of interatomic Contacts of Structural Units in PDB entry:
7BVH

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7BVH entry

There are 2 chains in PDB entry 7BVH (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER 10	HIS 1075
B	SER 10	ALA 287

There are 95 helices in PDB entry 7BVH. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	12	33	Right-handed alpha
Helix 2	AA2	A	34	36	Right-handed 310
Helix 3	AA3	A	77	82	Right-handed alpha
Helix 4	AA4	A	130	135	Right-handed alpha
Helix 5	AA5	A	213	240	Right-handed alpha
Helix 6	AA6	A	257	274	Right-handed alpha
Helix 7	AA7	A	279	294	Right-handed alpha
Helix 8	AA8	A	312	322	Right-handed alpha
Helix 9	AA9	A	326	331	Right-handed alpha
Helix 10	AB1	A	331	348	Right-handed alpha
Helix 11	AB2	A	348	354	Right-handed alpha
Helix 12	AB3	A	354	360	Right-handed alpha
Helix 13	AB4	A	360	380	Right-handed alpha
Helix 14	AB5	A	384	405	Right-handed alpha
Helix 15	AB6	A	408	423	Right-handed alpha
Helix 16	AB7	A	425	429	Right-handed 310
Helix 17	AB8	A	430	449	Right-handed alpha
Helix 18	AB9	A	454	468	Right-handed alpha
Helix 19	AC1	A	469	474	Right-handed alpha
Helix 20	AC2	A	478	493	Right-handed alpha
Helix 21	AC3	A	497	500	Right-handed 310
Helix 22	AC4	A	501	509	Right-handed alpha
Helix 23	AC5	A	516	540	Right-handed alpha
Helix 24	AC6	A	547	565	Right-handed alpha
Helix 25	AC7	A	566	568	Right-handed 310
Helix 26	AC8	A	572	578	Right-handed 310
Helix 27	AC9	A	579	595	Right-handed alpha
Helix 28	AD1	A	601	620	Right-handed alpha
Helix 29	AD2	A	628	632	Right-handed 310
Helix 30	AD3	A	646	669	Right-handed alpha
Helix 31	AD4	A	679	686	Right-handed alpha
Helix 32	AD5	A	687	711	Right-handed alpha
Helix 33	AD6	A	716	727	Right-handed alpha
Helix 34	AD7	A	821	825	Right-handed 310
Helix 35	AD8	A	882	888	Right-handed alpha
Helix 36	AD9	A	914	916	Right-handed 310
Helix 37	AE1	A	951	956	Right-handed alpha
Helix 38	AE2	A	994	1002	Right-handed alpha
Helix 39	AE3	A	1003	1005	Right-handed 310
Helix 40	AE4	A	1011	1014	Right-handed 310
Helix 41	AE5	A	1015	1019	Right-handed alpha
Helix 42	AE6	B	12	33	Right-handed alpha
Helix 43	AE7	B	48	51	Right-handed 310
Helix 44	AE8	B	77	82	Right-handed alpha
Helix 45	AE9	B	130	134	Right-handed alpha
Helix 46	AF1	B	213	239	Right-handed alpha
Helix 47	AF2	B	257	274	Right-handed alpha
Helix 48	AF3	B	279	294	Right-handed alpha
Helix 49	AF4	B	312	324	Right-handed alpha
Helix 50	AF5	B	326	349	Right-handed alpha
Helix 51	AF6	B	350	353	Right-handed 310
Helix 52	AF7	B	354	360	Right-handed alpha
Helix 53	AF8	B	361	380	Right-handed alpha
Helix 54	AF9	B	384	406	Right-handed alpha
Helix 55	AG1	B	408	423	Right-handed alpha
Helix 56	AG2	B	424	430	Right-handed 310
Helix 57	AG3	B	431	448	Right-handed alpha
Helix 58	AG4	B	454	468	Right-handed alpha
Helix 59	AG5	B	468	474	Right-handed alpha
Helix 60	AG6	B	478	493	Right-handed alpha
Helix 61	AG7	B	497	500	Right-handed 310
Helix 62	AG8	B	501	507	Right-handed alpha
Helix 63	AG9	B	508	510	Right-handed 310
Helix 64	AH1	B	516	540	Right-handed alpha
Helix 65	AH2	B	547	565	Right-handed alpha
Helix 66	AH3	B	566	568	Right-handed 310
Helix 67	AH4	B	573	578	Right-handed 310
Helix 68	AH5	B	579	594	Right-handed alpha
Helix 69	AH6	B	601	620	Right-handed alpha
Helix 70	AH7	B	627	632	Right-handed 310
Helix 71	AH8	B	646	669	Right-handed alpha
Helix 72	AH9	B	679	687	Right-handed alpha
Helix 73	AI1	B	687	710	Right-handed alpha
Helix 74	AI2	B	716	724	Right-handed alpha
Helix 75	AI3	B	730	734	Right-handed 310
Helix 76	AI4	B	754	758	Right-handed 310
Helix 77	AI5	B	821	825	Right-handed 310
Helix 78	AI6	B	872	875	Right-handed 310
Helix 79	AI7	B	882	889	Right-handed alpha
Helix 80	AI8	B	914	916	Right-handed 310
Helix 81	AI9	B	951	955	Right-handed alpha
Helix 82	AJ1	B	994	1002	Right-handed alpha
Helix 83	AJ2	B	1003	1005	Right-handed 310
Helix 84	AJ3	B	1006	1010	Right-handed 310
Helix 85	AJ4	B	1012	1017	Right-handed alpha
Helix 86	AJ5	C	4	20	Right-handed alpha
Helix 87	AJ6	C	40	55	Right-handed alpha
Helix 88	AJ7	C	62	67	Right-handed alpha
Helix 89	AJ8	C	69	79	Right-handed alpha
Helix 90	AJ9	C	80	84	Right-handed 310
Helix 91	AK1	D	5	21	Right-handed alpha
Helix 92	AK2	D	23	27	Right-handed 310
Helix 93	AK3	D	40	56	Right-handed alpha
Helix 94	AK4	D	60	65	Right-handed alpha
Helix 95	AK5	D	69	79	Right-handed alpha

There are 19 sheets in PDB entry 7BVH. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	169	175	first strand
Strand 2	A	149	158	anti-parallel
Strand 3	A	140	145	anti-parallel
Strand 4	A	68	73	anti-parallel
Strand 5	A	199	204	anti-parallel
Strand 6	A	38	46	anti-parallel
Strand 7	A	210	212	anti-parallel

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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	169	175	first strand
Strand 2	A	149	158	anti-parallel
Strand 3	A	140	145	anti-parallel
Strand 4	A	68	73	anti-parallel
Strand 5	A	199	204	anti-parallel
Strand 6	A	38	46	anti-parallel
Strand 7	A	1058	1062	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	56	57	first strand
Strand 2	A	185	186	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	90	93	first strand
Strand 2	A	107	112	anti-parallel
Strand 3	A	115	120	anti-parallel
Strand 4	A	123	129	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	949	950	first strand
Strand 2	A	736	738	anti-parallel
Strand 3	A	1027	1029	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	833	834	first strand
Strand 2	A	939	940	anti-parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	845	847	first strand
Strand 2	A	922	928	anti-parallel
Strand 3	A	851	852	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	845	847	first strand
Strand 2	A	922	928	anti-parallel
Strand 3	A	876	881	anti-parallel
Strand 4	A	895	896	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	862	867	first strand
Strand 2	A	907	912	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	961	963	first strand
Strand 2	A	989	992	parallel
Strand 3	A	1039	1045	anti-parallel
Strand 4	A	1020	1025	anti-parallel

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There are 7 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	171	174	first strand
Strand 2	B	150	155	anti-parallel
Strand 3	B	140	145	anti-parallel
Strand 4	B	67	73	anti-parallel
Strand 5	B	199	203	anti-parallel
Strand 6	B	38	46	anti-parallel
Strand 7	B	210	211	anti-parallel

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There are 7 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	171	174	first strand
Strand 2	B	150	155	anti-parallel
Strand 3	B	140	145	anti-parallel
Strand 4	B	67	73	anti-parallel
Strand 5	B	199	203	anti-parallel
Strand 6	B	38	46	anti-parallel
Strand 7	B	1055	1062	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	56	57	first strand
Strand 2	B	1051	1052	parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	90	93	first strand
Strand 2	B	107	112	anti-parallel
Strand 3	B	115	120	anti-parallel
Strand 4	B	123	129	anti-parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	948	950	first strand
Strand 2	B	736	739	anti-parallel
Strand 3	B	1027	1029	anti-parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	762	763	first strand
Strand 2	B	846	847	anti-parallel
Strand 3	B	922	927	anti-parallel
Strand 4	B	851	852	anti-parallel

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There are 5 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	762	763	first strand
Strand 2	B	846	847	anti-parallel
Strand 3	B	922	927	anti-parallel
Strand 4	B	877	881	anti-parallel
Strand 5	B	894	896	anti-parallel

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There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	907	912	first strand
Strand 2	B	862	868	anti-parallel
Strand 3	B	939	940	anti-parallel

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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	961	963	first strand
Strand 2	B	989	992	parallel
Strand 3	B	1039	1045	anti-parallel
Strand 4	B	1020	1025	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7BVH

Analysis of interatomic Contacts of Structural Units in PDB entry:
7BVH