Analysis of interatomic Contacts of Structural Units in PDB entry:
7BVI

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7BVI entry

There are 4 chains in PDB entry 7BVI (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLU 4	LYS 434
B	GLU 4	LYS 434
C	MET 1	LYS 434
D	GLU 4	ILE 435

There are 57 helices in PDB entry 7BVI. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	15	28	Right-handed alpha
Helix 2	AA2	A	47	57	Right-handed 310
Helix 3	AA3	A	70	74	Right-handed 310
Helix 4	AA4	A	79	86	Right-handed alpha
Helix 5	AA5	A	129	134	Right-handed 310
Helix 6	AA6	A	148	163	Right-handed alpha
Helix 7	AA7	A	173	186	Right-handed alpha
Helix 8	AA8	A	205	219	Right-handed alpha
Helix 9	AA9	A	266	270	Right-handed 310
Helix 10	AB1	A	305	308	Right-handed 310
Helix 11	AB2	A	315	335	Right-handed alpha
Helix 12	AB3	A	401	415	Right-handed alpha
Helix 13	AB4	A	420	428	Right-handed alpha
Helix 14	AB5	A	429	434	Right-handed alpha
Helix 15	AB6	B	15	29	Right-handed alpha
Helix 16	AB7	B	47	52	Right-handed 310
Helix 17	AB8	B	53	57	Right-handed 310
Helix 18	AB9	B	70	74	Right-handed 310
Helix 19	AC1	B	79	85	Right-handed alpha
Helix 20	AC2	B	129	133	Right-handed 310
Helix 21	AC3	B	148	162	Right-handed alpha
Helix 22	AC4	B	173	186	Right-handed alpha
Helix 23	AC5	B	205	219	Right-handed alpha
Helix 24	AC6	B	266	270	Right-handed 310
Helix 25	AC7	B	305	308	Right-handed 310
Helix 26	AC8	B	315	335	Right-handed alpha
Helix 27	AC9	B	401	415	Right-handed alpha
Helix 28	AD1	B	420	428	Right-handed alpha
Helix 29	AD2	B	428	434	Right-handed alpha
Helix 30	AD3	C	15	29	Right-handed alpha
Helix 31	AD4	C	47	57	Right-handed 310
Helix 32	AD5	C	70	74	Right-handed 310
Helix 33	AD6	C	79	86	Right-handed alpha
Helix 34	AD7	C	129	134	Right-handed 310
Helix 35	AD8	C	148	162	Right-handed alpha
Helix 36	AD9	C	173	186	Right-handed alpha
Helix 37	AE1	C	205	219	Right-handed alpha
Helix 38	AE2	C	266	270	Right-handed 310
Helix 39	AE3	C	305	308	Right-handed 310
Helix 40	AE4	C	315	336	Right-handed alpha
Helix 41	AE5	C	401	415	Right-handed alpha
Helix 42	AE6	C	420	427	Right-handed alpha
Helix 43	AE7	C	427	434	Right-handed alpha
Helix 44	AE8	D	15	28	Right-handed alpha
Helix 45	AE9	D	47	57	Right-handed 310
Helix 46	AF1	D	70	74	Right-handed 310
Helix 47	AF2	D	79	85	Right-handed alpha
Helix 48	AF3	D	129	134	Right-handed 310
Helix 49	AF4	D	148	162	Right-handed alpha
Helix 50	AF5	D	173	186	Right-handed alpha
Helix 51	AF6	D	205	219	Right-handed alpha
Helix 52	AF7	D	266	270	Right-handed 310
Helix 53	AF8	D	305	308	Right-handed 310
Helix 54	AF9	D	315	336	Right-handed alpha
Helix 55	AG1	D	401	415	Right-handed alpha
Helix 56	AG2	D	420	428	Right-handed alpha
Helix 57	AG3	D	429	435	Right-handed alpha

There are 27 sheets in PDB entry 7BVI. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	89	91	first strand
Strand 2	A	35	38	parallel
Strand 3	A	5	12	parallel
Strand 4	A	113	121	parallel
Strand 5	A	105	108	anti-parallel
Strand 6	A	96	100	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	89	91	first strand
Strand 2	A	35	38	parallel
Strand 3	A	5	12	parallel
Strand 4	A	113	121	parallel
Strand 5	A	293	295	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	125	127	first strand
Strand 2	A	262	264	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	143	145	first strand
Strand 2	A	255	258	parallel
Strand 3	A	166	170	parallel
Strand 4	A	189	194	parallel
Strand 5	A	222	225	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	229	234	first strand
Strand 2	A	240	245	anti-parallel
Strand 3	A	250	252	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	275	276	first strand
Strand 2	A	279	281	anti-parallel
Strand 3	A	300	304	parallel
Strand 4	A	309	312	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	347	352	first strand
Strand 2	A	355	361	anti-parallel
Strand 3	A	391	398	anti-parallel
Strand 4	A	381	388	anti-parallel
Strand 5	A	366	372	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	89	91	first strand
Strand 2	B	35	38	parallel
Strand 3	B	5	12	parallel
Strand 4	B	113	121	parallel
Strand 5	B	105	108	anti-parallel
Strand 6	B	96	100	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	89	91	first strand
Strand 2	B	35	38	parallel
Strand 3	B	5	12	parallel
Strand 4	B	113	121	parallel
Strand 5	B	293	295	parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	143	145	first strand
Strand 2	B	255	258	parallel
Strand 3	B	166	170	parallel
Strand 4	B	189	194	parallel
Strand 5	B	222	225	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	229	234	first strand
Strand 2	B	240	245	anti-parallel
Strand 3	B	250	252	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	275	276	first strand
Strand 2	B	279	281	anti-parallel
Strand 3	B	300	304	parallel
Strand 4	B	309	312	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	347	352	first strand
Strand 2	B	355	361	anti-parallel
Strand 3	B	391	398	anti-parallel
Strand 4	B	381	388	anti-parallel
Strand 5	B	366	372	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	5	6	first strand
Strand 2	C	113	115	parallel
Strand 3	C	105	108	anti-parallel
Strand 4	C	96	100	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	89	91	first strand
Strand 2	C	35	38	parallel
Strand 3	C	9	12	parallel
Strand 4	C	118	121	parallel
Strand 5	C	293	295	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	125	127	first strand
Strand 2	C	262	264	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	143	145	first strand
Strand 2	C	255	258	parallel
Strand 3	C	166	170	parallel
Strand 4	C	189	193	parallel
Strand 5	C	222	224	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	229	234	first strand
Strand 2	C	240	245	anti-parallel
Strand 3	C	250	252	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	275	276	first strand
Strand 2	C	279	281	anti-parallel
Strand 3	C	300	304	parallel
Strand 4	C	309	312	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	347	352	first strand
Strand 2	C	355	361	anti-parallel
Strand 3	C	391	398	anti-parallel
Strand 4	C	382	388	anti-parallel
Strand 5	C	366	371	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	5	6	first strand
Strand 2	D	113	115	parallel
Strand 3	D	105	108	anti-parallel
Strand 4	D	96	100	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	89	91	first strand
Strand 2	D	35	38	parallel
Strand 3	D	9	12	parallel
Strand 4	D	118	121	parallel
Strand 5	D	293	295	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	125	127	first strand
Strand 2	D	262	264	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	143	145	first strand
Strand 2	D	255	258	parallel
Strand 3	D	166	170	parallel
Strand 4	D	189	194	parallel
Strand 5	D	222	225	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	229	234	first strand
Strand 2	D	240	245	anti-parallel
Strand 3	D	250	252	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	275	276	first strand
Strand 2	D	279	281	anti-parallel
Strand 3	D	300	303	parallel
Strand 4	D	310	312	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	347	352	first strand
Strand 2	D	355	361	anti-parallel
Strand 3	D	391	398	anti-parallel
Strand 4	D	381	388	anti-parallel
Strand 5	D	366	372	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7BVI

Analysis of interatomic Contacts of Structural Units in PDB entry:
7BVI