Analysis of interatomic Contacts of Structural Units in PDB entry:
7BVK


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7BVK entry

There are 2 chains in PDB entry 7BVK (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1GLN 312
B
 MET 1GLN 312
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 25 helices in PDB entry 7BVK. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
14 26Right-handed alpha
Helix 2
AA2
A
35 46Right-handed alpha
Helix 3
AA3
A
53 59Right-handed alpha
Helix 4
AA4
A
69 71Right-handed 310
Helix 5
AA5
A
72 83Right-handed alpha
Helix 6
AA6
A
96 111Right-handed alpha
Helix 7
AA7
A
118 122Right-handed 310
Helix 8
AA8
A
123 132Right-handed alpha
Helix 9
AA9
A
156 161Right-handed alpha
Helix 10
AB1
A
162 174Right-handed alpha
Helix 11
AB2
A
267 283Right-handed alpha
Helix 12
AB3
A
289 312Right-handed alpha
Helix 13
AB4
B
14 26Right-handed alpha
Helix 14
AB5
B
35 47Right-handed alpha
Helix 15
AB6
B
53 59Right-handed alpha
Helix 16
AB7
B
69 71Right-handed 310
Helix 17
AB8
B
72 83Right-handed alpha
Helix 18
AB9
B
96 110Right-handed alpha
Helix 19
AC1
B
118 122Right-handed 310
Helix 20
AC2
B
123 132Right-handed alpha
Helix 21
AC3
B
151 155Right-handed 310
Helix 22
AC4
B
156 161Right-handed alpha
Helix 23
AC5
B
161 174Right-handed alpha
Helix 24
AC6
B
267 283Right-handed alpha
Helix 25
AC7
B
289 312Right-handed alpha
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There are 4 sheets in PDB entry 7BVK. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
49 50first strand
Strand 2
A
27 32parallel
Strand 3
A
5 9parallel
Strand 4
A
63 66parallel
Strand 5
A
86 90parallel
Strand 6
A
114 117parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
177 185first strand
Strand 2
A
194 201anti-parallel
Strand 3
A
206 215anti-parallel
Strand 4
A
139 147parallel
Strand 5
A
219 225anti-parallel
Strand 6
A
229 234anti-parallel
Strand 7
A
239 244anti-parallel
Strand 8
A
257 261anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
49 50first strand
Strand 2
B
27 32parallel
Strand 3
B
5 9parallel
Strand 4
B
63 66parallel
Strand 5
B
86 90parallel
Strand 6
B
114 117parallel
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There are 8 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
177 185first strand
Strand 2
B
194 201anti-parallel
Strand 3
B
206 215anti-parallel
Strand 4
B
139 147parallel
Strand 5
B
219 225anti-parallel
Strand 6
B
229 234anti-parallel
Strand 7
B
239 244anti-parallel
Strand 8
B
257 261anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il