Analysis of interatomic Contacts of Structural Units in PDB entry:
7BVX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7BVX entry

There is 1 chain in PDB entry 7BVX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 597PRO 856
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There is 1 helix in PDB entry 7BVX. Click on helix number for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
615 620Right-handed alpha
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There are 5 sheets in PDB entry 7BVX. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
604 606first strand
Strand 2
A
722 731parallel
Strand 3
A
665 666anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
647 648first strand
Strand 2
A
599 601anti-parallel
Strand 3
A
722 731parallel
Strand 4
A
710 716anti-parallel
Strand 5
A
700 705anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
635 640first strand
Strand 2
A
621 627anti-parallel
Strand 3
A
652 660anti-parallel
Strand 4
A
671 676anti-parallel
Strand 5
A
686 687anti-parallel
Strand 6
A
690 691anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
775 776first strand
Strand 2
A
736 742anti-parallel
Strand 3
A
842 848parallel
Strand 4
A
834 839anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
764 767first strand
Strand 2
A
753 758anti-parallel
Strand 3
A
786 790anti-parallel
Strand 4
A
805 808anti-parallel
Strand 5
A
817 818anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il