Analysis of interatomic Contacts of Structural Units in PDB entry:
7BW4


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7BW4 entry

There are 4 chains in PDB entry 7BW4 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 31HIS 928
B
 ASP 78ASN 192
C
 SER 1ALA 65
D
 THR 84ALA 191
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 49 helices in PDB entry 7BW4. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
123 133Right-handed alpha
Helix 2
AA2
A
139 149Right-handed alpha
Helix 3
AA3
A
153 159Right-handed alpha
Helix 4
AA4
A
171 187Right-handed alpha
Helix 5
AA5
A
189 197Right-handed alpha
Helix 6
AA6
A
206 210Right-handed 310
Helix 7
AA7
A
234 242Right-handed alpha
Helix 8
AA8
A
243 246Right-handed 310
Helix 9
AA9
A
250 255Right-handed alpha
Helix 10
AB1
A
275 287Right-handed alpha
Helix 11
AB2
A
297 301Right-handed 310
Helix 12
AB3
A
303 319Right-handed alpha
Helix 13
AB4
A
367 377Right-handed alpha
Helix 14
AB5
A
378 384Right-handed alpha
Helix 15
AB6
A
416 426Right-handed alpha
Helix 16
AB7
A
446 458Right-handed alpha
Helix 17
AB8
A
466 480Right-handed alpha
Helix 18
AB9
A
511 519Right-handed alpha
Helix 19
AC1
A
520 532Right-handed alpha
Helix 20
AC2
A
561 581Right-handed alpha
Helix 21
AC3
A
596 607Right-handed alpha
Helix 22
AC4
A
621 626Right-handed alpha
Helix 23
AC5
A
627 641Right-handed alpha
Helix 24
AC6
A
647 663Right-handed alpha
Helix 25
AC7
A
684 709Right-handed alpha
Helix 26
AC8
A
718 733Right-handed alpha
Helix 27
AC9
A
738 752Right-handed alpha
Helix 28
AD1
A
768 774Right-handed alpha
Helix 29
AD2
A
778 791Right-handed alpha
Helix 30
AD3
A
795 799Right-handed 310
Helix 31
AD4
A
833 842Right-handed alpha
Helix 32
AD5
A
851 866Right-handed alpha
Helix 33
AD6
A
867 872Right-handed 310
Helix 34
AD7
A
874 895Right-handed alpha
Helix 35
AD8
A
918 923Right-handed alpha
Helix 36
AD9
A
924 926Right-handed 310
Helix 37
AE1
B
79 97Right-handed alpha
Helix 38
AE2
B
101 109Right-handed alpha
Helix 39
AE3
B
119 124Right-handed alpha
Helix 40
AE4
B
134 142Right-handed alpha
Helix 41
AE5
B
168 172Right-handed 310
Helix 42
AE6
B
176 180Right-handed 310
Helix 43
AE7
C
3 20Right-handed alpha
Helix 44
AE8
C
21 24Right-handed 310
Helix 45
AE9
C
25 40Right-handed alpha
Helix 46
AF1
C
46 62Right-handed alpha
Helix 47
AF2
D
85 99Right-handed alpha
Helix 48
AF3
D
100 113Right-handed alpha
Helix 49
AF4
D
134 141Right-handed alpha
Back to top of page

There are 10 sheets in PDB entry 7BW4. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
32 38first strand
Strand 2
A
43 49anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
223 224first strand
Strand 2
A
201 204anti-parallel
Strand 3
A
231 233parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
353 355first strand
Strand 2
A
338 347anti-parallel
Strand 3
A
327 335anti-parallel
Strand 4
B
115 116anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
387 390first strand
Strand 2
B
127 132parallel
Strand 3
B
184 191anti-parallel
Strand 4
B
152 160anti-parallel
Strand 5
B
146 149anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
414 415first strand
Strand 2
A
843 844anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
556 559first strand
Strand 2
A
539 544anti-parallel
Strand 3
A
666 668parallel
Strand 4
A
673 675anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
753 758first strand
Strand 2
A
761 767anti-parallel
Strand 3
A
612 615anti-parallel
Strand 4
A
801 802anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
816 821first strand
Strand 2
A
826 831anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
115 116first strand
Strand 2
D
128 131anti-parallel
Strand 3
D
185 190anti-parallel
Strand 4
D
154 155anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
142 143first strand
Strand 2
D
146 147anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il