Analysis of interatomic Contacts of Structural Units in PDB entry:
7BWK

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7BWK entry

There are 10 chains in PDB entry 7BWK (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	VAL 667	ALA 779
B	GLU 2	ASP 114
C	PRO 2	ASP 150
D	ASP 26	ALA 206
E	SER 462	ASN 577
F	GLU 669	ALA 779
G	GLU 2	ASP 114
H	PRO 2	ASP 150
I	ILE 25	THR 205
J	ASN 461	LEU 576

There are 59 helices in PDB entry 7BWK. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	694	700	Right-handed alpha
Helix 2	AA2	A	704	719	Right-handed alpha
Helix 3	AA3	A	722	741	Right-handed alpha
Helix 4	AA4	A	754	778	Right-handed alpha
Helix 5	AA5	B	4	16	Right-handed alpha
Helix 6	AA6	B	28	33	Right-handed alpha
Helix 7	AA7	B	38	55	Right-handed alpha
Helix 8	AA8	B	81	100	Right-handed alpha
Helix 9	AA9	B	109	114	Right-handed 310
Helix 10	AB1	C	5	16	Right-handed alpha
Helix 11	AB2	C	19	30	Right-handed alpha
Helix 12	AB3	C	39	53	Right-handed alpha
Helix 13	AB4	C	60	65	Right-handed alpha
Helix 14	AB5	C	66	76	Right-handed alpha
Helix 15	AB6	C	78	93	Right-handed alpha
Helix 16	AB7	C	95	108	Right-handed alpha
Helix 17	AB8	C	113	135	Right-handed alpha
Helix 18	AB9	C	136	149	Right-handed alpha
Helix 19	AC1	D	32	45	Right-handed alpha
Helix 20	AC2	D	95	98	Right-handed 310
Helix 21	AC3	D	105	126	Right-handed alpha
Helix 22	AC4	D	141	153	Right-handed alpha
Helix 23	AC5	D	166	183	Right-handed alpha
Helix 24	AC6	D	194	198	Right-handed 310
Helix 25	AC7	E	463	487	Right-handed alpha
Helix 26	AC8	E	492	505	Right-handed alpha
Helix 27	AC9	E	511	528	Right-handed alpha
Helix 28	AD1	E	530	544	Right-handed alpha
Helix 29	AD2	E	545	549	Right-handed 310
Helix 30	AD3	E	553	572	Right-handed alpha
Helix 31	AD4	F	694	700	Right-handed alpha
Helix 32	AD5	F	704	719	Right-handed alpha
Helix 33	AD6	F	722	741	Right-handed alpha
Helix 34	AD7	F	752	778	Right-handed alpha
Helix 35	AD8	G	3	16	Right-handed alpha
Helix 36	AD9	G	28	34	Right-handed alpha
Helix 37	AE1	G	38	55	Right-handed alpha
Helix 38	AE2	G	81	100	Right-handed alpha
Helix 39	AE3	G	109	114	Right-handed 310
Helix 40	AE4	H	5	16	Right-handed alpha
Helix 41	AE5	H	19	30	Right-handed alpha
Helix 42	AE6	H	39	54	Right-handed alpha
Helix 43	AE7	H	60	65	Right-handed alpha
Helix 44	AE8	H	66	75	Right-handed alpha
Helix 45	AE9	H	78	93	Right-handed alpha
Helix 46	AF1	H	95	106	Right-handed alpha
Helix 47	AF2	H	113	135	Right-handed alpha
Helix 48	AF3	H	136	149	Right-handed alpha
Helix 49	AF4	I	32	45	Right-handed alpha
Helix 50	AF5	I	95	98	Right-handed 310
Helix 51	AF6	I	105	126	Right-handed alpha
Helix 52	AF7	I	141	153	Right-handed alpha
Helix 53	AF8	I	166	183	Right-handed alpha
Helix 54	AF9	I	194	198	Right-handed 310
Helix 55	AG1	J	462	487	Right-handed alpha
Helix 56	AG2	J	492	505	Right-handed alpha
Helix 57	AG3	J	511	528	Right-handed alpha
Helix 58	AG4	J	530	544	Right-handed alpha
Helix 59	AG5	J	553	573	Right-handed alpha

There are 7 sheets in PDB entry 7BWK. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	25	27	first strand
Strand 2	B	20	22	anti-parallel
Strand 3	B	106	107	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	60	64	first strand
Strand 2	B	72	76	anti-parallel

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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	64	66	first strand
Strand 2	D	83	85	anti-parallel
Strand 3	D	89	93	anti-parallel
Strand 4	D	47	54	anti-parallel
Strand 5	D	134	140	anti-parallel
Strand 6	D	159	161	parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	76	77	first strand
Strand 2	D	200	201	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	26	27	first strand
Strand 2	G	20	21	anti-parallel
Strand 3	G	106	107	parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	60	64	first strand
Strand 2	G	72	76	anti-parallel

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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	64	66	first strand
Strand 2	I	83	85	anti-parallel
Strand 3	I	89	93	anti-parallel
Strand 4	I	47	54	anti-parallel
Strand 5	I	134	140	anti-parallel
Strand 6	I	159	161	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7BWK

Analysis of interatomic Contacts of Structural Units in PDB entry:
7BWK