Analysis of interatomic Contacts of Structural Units in PDB entry:
7BWM

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7BWM entry

There is 1 chain in PDB entry 7BWM (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASN 60	THR 1387

There are 43 helices in PDB entry 7BWM. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	112	124	Right-handed alpha
Helix 2	AA2	A	176	181	Right-handed alpha
Helix 3	AA3	A	204	209	Right-handed alpha
Helix 4	AA4	A	210	213	Right-handed 310
Helix 5	AA5	A	248	254	Right-handed 310
Helix 6	AA6	A	310	312	Right-handed 310
Helix 7	AA7	A	328	333	Right-handed 310
Helix 8	AA8	A	358	365	Right-handed alpha
Helix 9	AA9	A	365	370	Right-handed alpha
Helix 10	AB1	A	395	401	Right-handed alpha
Helix 11	AB2	A	404	409	Right-handed 310
Helix 12	AB3	A	415	426	Right-handed alpha
Helix 13	AB4	A	438	442	Right-handed 310
Helix 14	AB5	A	483	490	Right-handed alpha
Helix 15	AB6	A	542	546	Right-handed alpha
Helix 16	AB7	A	607	610	Right-handed 310
Helix 17	AB8	A	611	619	Right-handed alpha
Helix 18	AB9	A	630	634	Right-handed 310
Helix 19	AC1	A	641	645	Right-handed 310
Helix 20	AC2	A	662	666	Right-handed 310
Helix 21	AC3	A	670	678	Right-handed alpha
Helix 22	AC4	A	701	710	Right-handed alpha
Helix 23	AC5	A	739	744	Right-handed alpha
Helix 24	AC6	A	753	757	Right-handed 310
Helix 25	AC7	A	761	767	Right-handed alpha
Helix 26	AC8	A	779	785	Right-handed 310
Helix 27	AC9	A	797	808	Right-handed alpha
Helix 28	AD1	A	822	826	Right-handed 310
Helix 29	AD2	A	915	919	Right-handed alpha
Helix 30	AD3	A	981	985	Right-handed 310
Helix 31	AD4	A	988	1002	Right-handed alpha
Helix 32	AD5	A	1019	1023	Right-handed 310
Helix 33	AD6	A	1026	1031	Right-handed alpha
Helix 34	AD7	A	1049	1059	Right-handed alpha
Helix 35	AD8	A	1067	1071	Right-handed 310
Helix 36	AD9	A	1146	1154	Right-handed alpha
Helix 37	AE1	A	1179	1187	Right-handed alpha
Helix 38	AE2	A	1195	1201	Right-handed alpha
Helix 39	AE3	A	1218	1223	Right-handed 310
Helix 40	AE4	A	1255	1260	Right-handed alpha
Helix 41	AE5	A	1263	1275	Right-handed alpha
Helix 42	AE6	A	1302	1307	Right-handed alpha
Helix 43	AE7	A	1326	1338	Right-handed alpha

There are 15 sheets in PDB entry 7BWM. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	67	68	first strand
Strand 2	A	87	93	anti-parallel
Strand 3	A	78	81	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	67	68	first strand
Strand 2	A	87	93	anti-parallel
Strand 3	A	126	131	anti-parallel
Strand 4	A	137	141	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	161	162	first strand
Strand 2	A	166	167	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	184	191	first strand
Strand 2	A	194	203	anti-parallel
Strand 3	A	372	378	anti-parallel
Strand 4	A	386	393	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	245	246	first strand
Strand 2	A	315	316	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	257	259	first strand
Strand 2	A	286	292	anti-parallel
Strand 3	A	307	308	anti-parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	257	259	first strand
Strand 2	A	286	292	anti-parallel
Strand 3	A	690	693	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	319	320	first strand
Strand 2	A	323	324	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	494	497	first strand
Strand 2	A	500	503	anti-parallel
Strand 3	A	522	528	anti-parallel
Strand 4	A	535	541	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	574	582	first strand
Strand 2	A	585	592	anti-parallel
Strand 3	A	732	738	anti-parallel
Strand 4	A	787	791	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	862	863	first strand
Strand 2	A	892	893	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	913	914	first strand
Strand 2	A	967	968	anti-parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1006	1008	first strand
Strand 2	A	1087	1092	anti-parallel
Strand 3	A	1214	1217	anti-parallel

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There are 5 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1107	1109	first strand
Strand 2	A	1112	1117	anti-parallel
Strand 3	A	1120	1124	anti-parallel
Strand 4	A	1137	1141	anti-parallel
Strand 5	A	1366	1368	parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1162	1167	first strand
Strand 2	A	1173	1178	anti-parallel
Strand 3	A	1287	1291	anti-parallel
Strand 4	A	1374	1377	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7BWM

Analysis of interatomic Contacts of Structural Units in PDB entry:
7BWM