Analysis of interatomic Contacts of Structural Units in PDB entry:
7BWR

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7BWR entry

There are 4 chains in PDB entry 7BWR (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	VAL 23	PRO 1082
B	VAL 23	SER 1074
C	ALA 3	LEU 80
D	ALA 3	LEU 80

There are 70 helices in PDB entry 7BWR. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	24	32	Right-handed alpha
Helix 2	AA2	A	34	44	Right-handed alpha
Helix 3	AA3	A	108	113	Right-handed alpha
Helix 4	AA4	A	136	142	Right-handed alpha
Helix 5	AA5	A	219	244	Right-handed alpha
Helix 6	AA6	A	265	270	Right-handed alpha
Helix 7	AA7	A	274	280	Right-handed alpha
Helix 8	AA8	A	285	295	Right-handed alpha
Helix 9	AA9	A	295	300	Right-handed alpha
Helix 10	AB1	A	319	325	Right-handed alpha
Helix 11	AB2	A	337	345	Right-handed 310
Helix 12	AB3	A	347	352	Right-handed alpha
Helix 13	AB4	A	356	359	Right-handed 310
Helix 14	AB5	A	360	366	Right-handed alpha
Helix 15	AB6	A	367	382	Right-handed alpha
Helix 16	AB7	A	391	412	Right-handed alpha
Helix 17	AB8	A	414	427	Right-handed alpha
Helix 18	AB9	A	434	444	Right-handed alpha
Helix 19	AC1	A	444	455	Right-handed alpha
Helix 20	AC2	A	461	471	Right-handed alpha
Helix 21	AC3	A	475	480	Right-handed alpha
Helix 22	AC4	A	484	499	Right-handed alpha
Helix 23	AC5	A	505	509	Right-handed 310
Helix 24	AC6	A	521	528	Right-handed alpha
Helix 25	AC7	A	536	546	Right-handed alpha
Helix 26	AC8	A	555	571	Right-handed alpha
Helix 27	AC9	A	583	586	Right-handed 310
Helix 28	AD1	A	587	600	Right-handed alpha
Helix 29	AD2	A	607	626	Right-handed alpha
Helix 30	AD3	A	653	676	Right-handed alpha
Helix 31	AD4	A	682	687	Right-handed alpha
Helix 32	AD5	A	689	713	Right-handed alpha
Helix 33	AD6	A	718	726	Right-handed alpha
Helix 34	AD7	A	733	735	Right-handed 310
Helix 35	AD8	A	850	855	Right-handed alpha
Helix 36	AD9	A	958	962	Right-handed alpha
Helix 37	AE1	A	1001	1009	Right-handed alpha
Helix 38	AE2	A	1020	1024	Right-handed 310
Helix 39	AE3	B	27	43	Right-handed alpha
Helix 40	AE4	B	108	112	Right-handed 310
Helix 41	AE5	B	221	244	Right-handed alpha
Helix 42	AE6	B	266	278	Right-handed alpha
Helix 43	AE7	B	340	355	Right-handed alpha
Helix 44	AE8	B	366	381	Right-handed alpha
Helix 45	AE9	B	391	411	Right-handed alpha
Helix 46	AF1	B	414	429	Right-handed alpha
Helix 47	AF2	B	435	444	Right-handed alpha
Helix 48	AF3	B	444	455	Right-handed alpha
Helix 49	AF4	B	460	473	Right-handed alpha
Helix 50	AF5	B	473	481	Right-handed alpha
Helix 51	AF6	B	484	489	Right-handed alpha
Helix 52	AF7	B	529	547	Right-handed alpha
Helix 53	AF8	B	554	567	Right-handed alpha
Helix 54	AF9	B	587	600	Right-handed alpha
Helix 55	AG1	B	608	626	Right-handed alpha
Helix 56	AG2	B	657	676	Right-handed alpha
Helix 57	AG3	B	682	687	Right-handed alpha
Helix 58	AG4	B	692	703	Right-handed alpha
Helix 59	AG5	B	793	797	Right-handed 310
Helix 60	AG6	B	919	923	Right-handed 310
Helix 61	AG7	B	958	962	Right-handed alpha
Helix 62	AG8	B	1020	1027	Right-handed alpha
Helix 63	AG9	C	6	20	Right-handed alpha
Helix 64	AH1	C	42	55	Right-handed alpha
Helix 65	AH2	C	60	67	Right-handed alpha
Helix 66	AH3	C	70	78	Right-handed alpha
Helix 67	AH4	D	6	20	Right-handed alpha
Helix 68	AH5	D	42	55	Right-handed alpha
Helix 69	AH6	D	60	67	Right-handed alpha
Helix 70	AH7	D	70	78	Right-handed alpha

There are 18 sheets in PDB entry 7BWR. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	147	150	first strand
Strand 2	A	76	84	anti-parallel
Strand 3	A	205	210	anti-parallel
Strand 4	A	49	57	anti-parallel
Strand 5	A	1064	1070	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	191	192	first strand
Strand 2	A	67	68	anti-parallel
Strand 3	A	1058	1059	parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	115	117	first strand
Strand 2	A	123	127	anti-parallel
Strand 3	A	130	135	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	956	957	first strand
Strand 2	A	737	739	anti-parallel
Strand 3	A	1035	1037	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	749	750	first strand
Strand 2	A	844	845	anti-parallel
Strand 3	A	929	936	anti-parallel
Strand 4	A	837	840	anti-parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	749	750	first strand
Strand 2	A	844	845	anti-parallel
Strand 3	A	929	936	anti-parallel
Strand 4	A	882	889	anti-parallel
Strand 5	A	897	902	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	826	827	first strand
Strand 2	A	945	947	anti-parallel
Strand 3	A	859	866	anti-parallel
Strand 4	A	914	919	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	986	987	first strand
Strand 2	A	990	991	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1028	1033	first strand
Strand 2	A	1048	1053	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	67	68	first strand
Strand 2	B	191	192	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	157	158	first strand
Strand 2	B	148	152	anti-parallel
Strand 3	B	80	83	anti-parallel
Strand 4	B	205	207	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	99	100	first strand
Strand 2	B	115	117	anti-parallel
Strand 3	B	123	126	anti-parallel
Strand 4	B	132	135	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	738	739	first strand
Strand 2	B	956	957	anti-parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	826	827	first strand
Strand 2	B	945	947	anti-parallel
Strand 3	B	865	866	anti-parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	837	840	first strand
Strand 2	B	932	936	anti-parallel
Strand 3	B	882	885	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	967	968	first strand
Strand 2	B	982	983	parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	986	987	first strand
Strand 2	B	990	991	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1028	1029	first strand
Strand 2	B	1052	1053	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7BWR

Analysis of interatomic Contacts of Structural Units in PDB entry:
7BWR