Analysis of interatomic Contacts of Structural Units in PDB entry:
7BWU

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7BWU entry

There are 3 chains in PDB entry 7BWU (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
B	PRO 126	ASP 569
D	GLY 122	ASP 568
A	PRO 126	PHE 532

There are 32 helices in PDB entry 7BWU. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	B	129	133	Right-handed 310
Helix 2	AA2	B	147	149	Right-handed 310
Helix 3	AA3	B	257	262	Right-handed alpha
Helix 4	AA4	B	287	292	Right-handed alpha
Helix 5	AA5	B	324	329	Right-handed alpha
Helix 6	AA6	B	347	358	Right-handed alpha
Helix 7	AA7	B	359	360	Right-handed 310
Helix 8	AA8	B	361	365	Right-handed 310
Helix 9	AA9	D	129	133	Right-handed 310
Helix 10	AB1	D	147	149	Right-handed 310
Helix 11	AB2	D	257	264	Right-handed alpha
Helix 12	AB3	D	287	292	Right-handed alpha
Helix 13	AB4	D	324	329	Right-handed alpha
Helix 14	AB5	D	347	358	Right-handed alpha
Helix 15	AB6	D	359	360	Right-handed 310
Helix 16	AB7	D	361	365	Right-handed 310
Helix 17	AB8	A	129	133	Right-handed 310
Helix 18	AB9	A	147	149	Right-handed 310
Helix 19	AC1	A	257	264	Right-handed alpha
Helix 20	AC2	A	287	292	Right-handed alpha
Helix 21	AC3	A	324	329	Right-handed alpha
Helix 22	AC4	A	347	358	Right-handed alpha
Helix 23	AC5	A	359	360	Right-handed 310
Helix 24	AC6	A	361	365	Right-handed 310
Helix 25	AC7	C	129	134	Right-handed alpha
Helix 26	AC8	C	147	149	Right-handed 310
Helix 27	AC9	C	257	262	Right-handed alpha
Helix 28	AD1	C	287	292	Right-handed alpha
Helix 29	AD2	C	324	331	Right-handed alpha
Helix 30	AD3	C	347	358	Right-handed alpha
Helix 31	AD4	C	359	360	Right-handed 310
Helix 32	AD5	C	361	365	Right-handed 310

There are 32 sheets in PDB entry 7BWU. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	141	142	first strand
Strand 2	B	474	478	parallel
Strand 3	B	484	492	anti-parallel
Strand 4	B	501	506	anti-parallel
Strand 5	B	515	516	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	151	153	first strand
Strand 2	B	556	567	anti-parallel
Strand 3	B	539	549	anti-parallel
Strand 4	B	524	534	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	172	180	first strand
Strand 2	B	185	192	anti-parallel
Strand 3	B	203	213	anti-parallel
Strand 4	B	219	229	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	235	243	first strand
Strand 2	B	246	253	anti-parallel
Strand 3	B	269	276	anti-parallel
Strand 4	B	281	285	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	295	300	first strand
Strand 2	B	311	320	anti-parallel
Strand 3	B	306	308	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	295	300	first strand
Strand 2	B	311	320	anti-parallel
Strand 3	B	369	377	anti-parallel
Strand 4	B	384	389	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	402	407	first strand
Strand 2	B	410	415	anti-parallel
Strand 3	B	424	431	anti-parallel
Strand 4	B	436	438	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	402	407	first strand
Strand 2	B	410	415	anti-parallel
Strand 3	B	424	431	anti-parallel
Strand 4	B	442	444	anti-parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	141	142	first strand
Strand 2	D	474	478	parallel
Strand 3	D	484	492	anti-parallel
Strand 4	D	501	506	anti-parallel
Strand 5	D	515	516	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	151	153	first strand
Strand 2	D	556	567	anti-parallel
Strand 3	D	539	549	anti-parallel
Strand 4	D	524	534	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	172	180	first strand
Strand 2	D	185	192	anti-parallel
Strand 3	D	203	213	anti-parallel
Strand 4	D	219	229	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	235	243	first strand
Strand 2	D	246	253	anti-parallel
Strand 3	D	269	276	anti-parallel
Strand 4	D	281	285	anti-parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	295	300	first strand
Strand 2	D	311	320	anti-parallel
Strand 3	D	306	308	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	295	300	first strand
Strand 2	D	311	320	anti-parallel
Strand 3	D	369	377	anti-parallel
Strand 4	D	384	389	anti-parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	402	407	first strand
Strand 2	D	410	415	anti-parallel
Strand 3	D	424	431	anti-parallel
Strand 4	D	436	438	anti-parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	402	407	first strand
Strand 2	D	410	415	anti-parallel
Strand 3	D	424	431	anti-parallel
Strand 4	D	442	444	anti-parallel

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There are 5 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	141	142	first strand
Strand 2	A	474	478	parallel
Strand 3	A	484	492	anti-parallel
Strand 4	A	501	506	anti-parallel
Strand 5	A	515	516	anti-parallel

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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	151	153	first strand
Strand 2	A	556	567	anti-parallel
Strand 3	A	539	549	anti-parallel
Strand 4	A	524	534	anti-parallel

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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	172	180	first strand
Strand 2	A	185	192	anti-parallel
Strand 3	A	203	213	anti-parallel
Strand 4	A	219	229	anti-parallel

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There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	235	243	first strand
Strand 2	A	246	253	anti-parallel
Strand 3	A	269	276	anti-parallel
Strand 4	A	281	285	anti-parallel

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There are 3 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	295	300	first strand
Strand 2	A	311	320	anti-parallel
Strand 3	A	306	308	anti-parallel

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There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	295	300	first strand
Strand 2	A	311	320	anti-parallel
Strand 3	A	369	377	anti-parallel
Strand 4	A	384	389	anti-parallel

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There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	402	407	first strand
Strand 2	A	410	415	anti-parallel
Strand 3	A	424	432	anti-parallel
Strand 4	A	435	438	anti-parallel

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There are 4 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	402	407	first strand
Strand 2	A	410	415	anti-parallel
Strand 3	A	424	432	anti-parallel
Strand 4	A	442	444	anti-parallel

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There are 5 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	141	142	first strand
Strand 2	C	474	478	parallel
Strand 3	C	484	492	anti-parallel
Strand 4	C	501	506	anti-parallel
Strand 5	C	515	516	anti-parallel

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There are 4 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	151	153	first strand
Strand 2	C	556	567	anti-parallel
Strand 3	C	539	549	anti-parallel
Strand 4	C	524	534	anti-parallel

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There are 4 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	172	180	first strand
Strand 2	C	185	192	anti-parallel
Strand 3	C	203	213	anti-parallel
Strand 4	C	219	229	anti-parallel

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There are 4 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	235	243	first strand
Strand 2	C	246	253	anti-parallel
Strand 3	C	269	276	anti-parallel
Strand 4	C	281	285	anti-parallel

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There are 3 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	295	300	first strand
Strand 2	C	311	320	anti-parallel
Strand 3	C	306	308	anti-parallel

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There are 4 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	295	300	first strand
Strand 2	C	311	320	anti-parallel
Strand 3	C	368	377	anti-parallel
Strand 4	C	384	389	anti-parallel

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There are 4 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	402	407	first strand
Strand 2	C	410	415	anti-parallel
Strand 3	C	424	432	anti-parallel
Strand 4	C	435	438	anti-parallel

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There are 4 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	402	407	first strand
Strand 2	C	410	415	anti-parallel
Strand 3	C	424	432	anti-parallel
Strand 4	C	442	444	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7BWU

Analysis of interatomic Contacts of Structural Units in PDB entry:
7BWU