Analysis of interatomic Contacts of Structural Units in PDB entry:
7BXR


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7BXR entry

There are 2 chains in PDB entry 7BXR (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ILE 399
B
 MET 1ILE 399
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 31 helices in PDB entry 7BXR. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
2 21Right-handed alpha
Helix 2
AA2
A
56 59Right-handed 310
Helix 3
AA3
A
60 75Right-handed alpha
Helix 4
AA4
A
88 103Right-handed alpha
Helix 5
AA5
A
112 119Right-handed alpha
Helix 6
AA6
A
120 125Right-handed alpha
Helix 7
AA7
A
138 147Right-handed alpha
Helix 8
AA8
A
159 173Right-handed alpha
Helix 9
AA9
A
194 206Right-handed alpha
Helix 10
AB1
A
226 231Right-handed alpha
Helix 11
AB2
A
259 270Right-handed alpha
Helix 12
AB3
A
270 276Right-handed alpha
Helix 13
AB4
A
280 297Right-handed alpha
Helix 14
AB5
A
300 317Right-handed alpha
Helix 15
AB6
A
336 350Right-handed alpha
Helix 16
AB7
A
378 396Right-handed alpha
Helix 17
AB8
B
2 21Right-handed alpha
Helix 18
AB9
B
60 75Right-handed alpha
Helix 19
AC1
B
88 103Right-handed alpha
Helix 20
AC2
B
112 119Right-handed alpha
Helix 21
AC3
B
120 125Right-handed alpha
Helix 22
AC4
B
138 147Right-handed alpha
Helix 23
AC5
B
159 173Right-handed alpha
Helix 24
AC6
B
194 206Right-handed alpha
Helix 25
AC7
B
226 231Right-handed alpha
Helix 26
AC8
B
260 270Right-handed alpha
Helix 27
AC9
B
270 276Right-handed alpha
Helix 28
AD1
B
280 297Right-handed alpha
Helix 29
AD2
B
298 318Right-handed alpha
Helix 30
AD3
B
336 350Right-handed alpha
Helix 31
AD4
B
378 396Right-handed alpha
Back to top of page

There are 6 sheets in PDB entry 7BXR. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
37 39first strand
Strand 2
A
45 48anti-parallel
Strand 3
A
352 353parallel
Back to list of sheets
Back to top of page

There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
106 110first strand
Strand 2
A
254 258anti-parallel
Strand 3
A
239 243anti-parallel
Strand 4
A
208 212parallel
Strand 5
A
178 183parallel
Strand 6
A
130 134parallel
Strand 7
A
151 155parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
329 335first strand
Strand 2
A
367 372anti-parallel
Strand 3
A
356 357anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
37 39first strand
Strand 2
B
45 48anti-parallel
Strand 3
B
352 353parallel
Back to list of sheets
Back to top of page

There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
106 110first strand
Strand 2
B
254 258anti-parallel
Strand 3
B
239 243anti-parallel
Strand 4
B
208 212parallel
Strand 5
B
178 183parallel
Strand 6
B
130 134parallel
Strand 7
B
151 155parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
329 335first strand
Strand 2
B
367 372anti-parallel
Strand 3
B
356 357anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il