Analysis of interatomic Contacts of Structural Units in PDB entry:
7BYJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7BYJ entry

There is 1 chain in PDB entry 7BYJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 196ALA 526
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 7BYJ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
225 238Right-handed alpha
Helix 2
AA2
A
241 243Right-handed 310
Helix 3
AA3
A
268 273Right-handed alpha
Helix 4
AA4
A
277 281Right-handed 310
Helix 5
AA5
A
293 301Right-handed alpha
Helix 6
AA6
A
301 318Right-handed alpha
Helix 7
AA7
A
326 344Right-handed alpha
Helix 8
AA8
A
352 360Right-handed alpha
Helix 9
AA9
A
361 366Right-handed 310
Helix 10
AB1
A
367 374Right-handed alpha
Helix 11
AB2
A
375 394Right-handed alpha
Helix 12
AB3
A
401 415Right-handed alpha
Helix 13
AB4
A
463 465Right-handed 310
Helix 14
AB5
A
498 516Right-handed alpha
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There are 3 sheets in PDB entry 7BYJ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
200 202first strand
Strand 2
A
205 209anti-parallel
Strand 3
A
215 219anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
200 202first strand
Strand 2
A
205 209anti-parallel
Strand 3
A
282 287parallel
Strand 4
A
245 252anti-parallel
Strand 5
A
258 263anti-parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
457 462first strand
Strand 2
A
446 452anti-parallel
Strand 3
A
433 442anti-parallel
Strand 4
A
422 430anti-parallel
Strand 5
A
492 497anti-parallel
Strand 6
A
479 486anti-parallel
Strand 7
A
467 472anti-parallel
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