Analysis of interatomic Contacts of Structural Units in PDB entry:
7BZ1

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7BZ1 entry

There are 4 chains in PDB entry 7BZ1 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER 9	GLY 373
B	SER 9	GLY 373
C	SER 9	GLY 373
D	SER 9	GLY 373

There are 60 helices in PDB entry 7BZ1. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	70	76	Right-handed alpha
Helix 2	AA2	A	80	84	Right-handed 310
Helix 3	AA3	A	93	98	Right-handed alpha
Helix 4	AA4	A	99	110	Right-handed alpha
Helix 5	AA5	A	125	128	Right-handed 310
Helix 6	AA6	A	129	141	Right-handed alpha
Helix 7	AA7	A	141	152	Right-handed alpha
Helix 8	AA8	A	154	157	Right-handed 310
Helix 9	AA9	A	215	221	Right-handed alpha
Helix 10	AB1	A	234	242	Right-handed alpha
Helix 11	AB2	A	245	253	Right-handed alpha
Helix 12	AB3	A	259	271	Right-handed alpha
Helix 13	AB4	A	286	296	Right-handed alpha
Helix 14	AB5	A	350	355	Right-handed alpha
Helix 15	AB6	A	360	373	Right-handed alpha
Helix 16	AB7	B	70	76	Right-handed alpha
Helix 17	AB8	B	80	84	Right-handed 310
Helix 18	AB9	B	93	98	Right-handed alpha
Helix 19	AC1	B	99	110	Right-handed alpha
Helix 20	AC2	B	125	128	Right-handed 310
Helix 21	AC3	B	129	141	Right-handed alpha
Helix 22	AC4	B	141	152	Right-handed alpha
Helix 23	AC5	B	154	157	Right-handed 310
Helix 24	AC6	B	215	221	Right-handed alpha
Helix 25	AC7	B	234	243	Right-handed alpha
Helix 26	AC8	B	245	255	Right-handed alpha
Helix 27	AC9	B	259	271	Right-handed alpha
Helix 28	AD1	B	286	296	Right-handed alpha
Helix 29	AD2	B	350	355	Right-handed alpha
Helix 30	AD3	B	364	372	Right-handed alpha
Helix 31	AD4	C	70	76	Right-handed alpha
Helix 32	AD5	C	80	84	Right-handed 310
Helix 33	AD6	C	93	98	Right-handed alpha
Helix 34	AD7	C	99	110	Right-handed alpha
Helix 35	AD8	C	125	128	Right-handed 310
Helix 36	AD9	C	129	141	Right-handed alpha
Helix 37	AE1	C	141	152	Right-handed alpha
Helix 38	AE2	C	154	157	Right-handed 310
Helix 39	AE3	C	215	221	Right-handed alpha
Helix 40	AE4	C	234	242	Right-handed alpha
Helix 41	AE5	C	245	255	Right-handed alpha
Helix 42	AE6	C	259	271	Right-handed alpha
Helix 43	AE7	C	286	296	Right-handed alpha
Helix 44	AE8	C	350	355	Right-handed alpha
Helix 45	AE9	C	360	373	Right-handed alpha
Helix 46	AF1	D	69	76	Right-handed alpha
Helix 47	AF2	D	80	84	Right-handed 310
Helix 48	AF3	D	93	98	Right-handed alpha
Helix 49	AF4	D	99	110	Right-handed alpha
Helix 50	AF5	D	125	128	Right-handed 310
Helix 51	AF6	D	129	141	Right-handed alpha
Helix 52	AF7	D	141	150	Right-handed alpha
Helix 53	AF8	D	154	157	Right-handed 310
Helix 54	AF9	D	216	221	Right-handed alpha
Helix 55	AG1	D	234	242	Right-handed alpha
Helix 56	AG2	D	245	255	Right-handed alpha
Helix 57	AG3	D	259	271	Right-handed alpha
Helix 58	AG4	D	286	296	Right-handed alpha
Helix 59	AG5	D	350	355	Right-handed alpha
Helix 60	AG6	D	364	371	Right-handed alpha

There are 8 sheets in PDB entry 7BZ1. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	159	164	first strand
Strand 2	A	116	121	parallel
Strand 3	A	86	88	parallel
Strand 4	A	61	66	parallel
Strand 5	A	51	56	anti-parallel
Strand 6	A	31	37	anti-parallel
Strand 7	A	309	313	anti-parallel
Strand 8	A	318	322	anti-parallel

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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	171	176	first strand
Strand 2	A	179	185	anti-parallel
Strand 3	A	194	200	anti-parallel
Strand 4	A	203	207	anti-parallel
Strand 5	A	226	230	parallel
Strand 6	A	274	278	parallel
Strand 7	A	302	304	parallel

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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	159	164	first strand
Strand 2	B	116	121	parallel
Strand 3	B	86	88	parallel
Strand 4	B	61	66	parallel
Strand 5	B	51	56	anti-parallel
Strand 6	B	31	37	anti-parallel
Strand 7	B	309	313	anti-parallel
Strand 8	B	318	322	anti-parallel

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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	171	176	first strand
Strand 2	B	179	185	anti-parallel
Strand 3	B	194	200	anti-parallel
Strand 4	B	203	207	anti-parallel
Strand 5	B	226	230	parallel
Strand 6	B	274	278	parallel
Strand 7	B	302	304	parallel

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There are 8 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	159	164	first strand
Strand 2	C	116	121	parallel
Strand 3	C	86	88	parallel
Strand 4	C	61	66	parallel
Strand 5	C	51	56	anti-parallel
Strand 6	C	31	37	anti-parallel
Strand 7	C	309	313	anti-parallel
Strand 8	C	318	322	anti-parallel

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There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	171	176	first strand
Strand 2	C	179	185	anti-parallel
Strand 3	C	194	200	anti-parallel
Strand 4	C	203	207	anti-parallel
Strand 5	C	226	230	parallel
Strand 6	C	274	278	parallel
Strand 7	C	302	304	parallel

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There are 8 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	159	164	first strand
Strand 2	D	116	121	parallel
Strand 3	D	86	88	parallel
Strand 4	D	61	66	parallel
Strand 5	D	51	56	anti-parallel
Strand 6	D	31	37	anti-parallel
Strand 7	D	309	313	anti-parallel
Strand 8	D	318	322	anti-parallel

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There are 7 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	171	176	first strand
Strand 2	D	179	185	anti-parallel
Strand 3	D	194	200	anti-parallel
Strand 4	D	203	207	anti-parallel
Strand 5	D	226	230	parallel
Strand 6	D	274	278	parallel
Strand 7	D	302	304	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7BZ1

Analysis of interatomic Contacts of Structural Units in PDB entry:
7BZ1