Analysis of interatomic Contacts of Structural Units in PDB entry:
7BZF

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7BZF entry

There are 6 chains in PDB entry 7BZF (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER 1	THR 929
B	LYS 79	ASN 192
C	SER 1	ILE 68
D	THR 84	ALA 191
F	C -5	C 4
G	G -4	A 4

There are 47 helices in PDB entry 7BZF. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	1	13	Right-handed alpha
Helix 2	AA2	A	61	63	Right-handed 310
Helix 3	AA3	A	76	88	Right-handed alpha
Helix 4	AA4	A	123	133	Right-handed alpha
Helix 5	AA5	A	153	157	Right-handed 310
Helix 6	AA6	A	170	177	Right-handed alpha
Helix 7	AA7	A	178	198	Right-handed alpha
Helix 8	AA8	A	206	210	Right-handed 310
Helix 9	AA9	A	234	242	Right-handed alpha
Helix 10	AB1	A	243	245	Right-handed 310
Helix 11	AB2	A	275	287	Right-handed alpha
Helix 12	AB3	A	303	318	Right-handed alpha
Helix 13	AB4	A	367	377	Right-handed alpha
Helix 14	AB5	A	378	383	Right-handed alpha
Helix 15	AB6	A	417	426	Right-handed alpha
Helix 16	AB7	A	448	454	Right-handed alpha
Helix 17	AB8	A	455	459	Right-handed 310
Helix 18	AB9	A	465	480	Right-handed alpha
Helix 19	AC1	A	505	509	Right-handed 310
Helix 20	AC2	A	511	519	Right-handed alpha
Helix 21	AC3	A	520	532	Right-handed alpha
Helix 22	AC4	A	561	581	Right-handed alpha
Helix 23	AC5	A	596	606	Right-handed alpha
Helix 24	AC6	A	621	626	Right-handed alpha
Helix 25	AC7	A	627	640	Right-handed alpha
Helix 26	AC8	A	647	663	Right-handed alpha
Helix 27	AC9	A	686	708	Right-handed alpha
Helix 28	AD1	A	711	715	Right-handed 310
Helix 29	AD2	A	719	733	Right-handed alpha
Helix 30	AD3	A	738	752	Right-handed alpha
Helix 31	AD4	A	768	774	Right-handed alpha
Helix 32	AD5	A	778	790	Right-handed alpha
Helix 33	AD6	A	833	843	Right-handed alpha
Helix 34	AD7	A	855	864	Right-handed alpha
Helix 35	AD8	A	867	872	Right-handed 310
Helix 36	AD9	A	874	896	Right-handed alpha
Helix 37	AE1	A	922	926	Right-handed 310
Helix 38	AE2	B	80	95	Right-handed alpha
Helix 39	AE3	B	100	108	Right-handed alpha
Helix 40	AE4	B	118	125	Right-handed alpha
Helix 41	AE5	B	134	142	Right-handed alpha
Helix 42	AE6	B	176	180	Right-handed 310
Helix 43	AE7	C	3	19	Right-handed alpha
Helix 44	AE8	C	26	41	Right-handed alpha
Helix 45	AE9	C	44	62	Right-handed alpha
Helix 46	AF1	D	85	94	Right-handed alpha
Helix 47	AF2	D	100	112	Right-handed alpha

There are 11 sheets in PDB entry 7BZF. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	19	20	first strand
Strand 2	A	55	60	anti-parallel
Strand 3	A	64	71	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	35	38	first strand
Strand 2	A	43	46	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	102	104	first strand
Strand 2	A	111	113	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	223	224	first strand
Strand 2	A	201	204	anti-parallel
Strand 3	A	232	233	parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	353	354	first strand
Strand 2	A	338	347	anti-parallel
Strand 3	A	327	335	anti-parallel
Strand 4	B	114	116	anti-parallel

Back to list of sheets
Back to top of page

There are 10 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	556	559	first strand
Strand 2	A	539	544	anti-parallel
Strand 3	A	666	668	parallel
Strand 4	A	672	675	anti-parallel
Strand 5	A	397	400	anti-parallel
Strand 6	A	386	390	anti-parallel
Strand 7	B	127	132	parallel
Strand 8	B	184	191	anti-parallel
Strand 9	B	153	161	anti-parallel
Strand 10	B	146	148	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	612	616	first strand
Strand 2	A	761	767	anti-parallel
Strand 3	A	753	754	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	612	616	first strand
Strand 2	A	761	767	anti-parallel
Strand 3	A	757	758	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	816	821	first strand
Strand 2	A	826	831	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	115	116	first strand
Strand 2	D	128	131	anti-parallel
Strand 3	D	185	188	anti-parallel
Strand 4	D	158	160	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	142	143	first strand
Strand 2	D	146	149	anti-parallel
Strand 3	D	152	154	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7BZF

Analysis of interatomic Contacts of Structural Units in PDB entry:
7BZF