Analysis of interatomic Contacts of Structural Units in PDB entry:
7BZM


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7BZM entry

There are 2 chains in PDB entry 7BZM (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 TRP 6HIS 476
B
 TRP 6HIS 476
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 48 helices in PDB entry 7BZM. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
11 15Right-handed 310
Helix 2
AA2
A
26 31Right-handed alpha
Helix 3
AA3
A
42 49Right-handed alpha
Helix 4
AA4
A
54 58Right-handed 310
Helix 5
AA5
A
65 80Right-handed alpha
Helix 6
AA6
A
90 95Right-handed alpha
Helix 7
AA7
A
103 120Right-handed alpha
Helix 8
AA8
A
134 142Right-handed alpha
Helix 9
AA9
A
143 147Right-handed 310
Helix 10
AB1
A
148 165Right-handed alpha
Helix 11
AB2
A
176 186Right-handed alpha
Helix 12
AB3
A
206 230Right-handed alpha
Helix 13
AB4
A
230 235Right-handed alpha
Helix 14
AB5
A
253 268Right-handed alpha
Helix 15
AB6
A
268 278Right-handed alpha
Helix 16
AB7
A
281 289Right-handed alpha
Helix 17
AB8
A
290 292Right-handed 310
Helix 18
AB9
A
296 304Right-handed alpha
Helix 19
AC1
A
334 338Right-handed 310
Helix 20
AC2
A
363 377Right-handed alpha
Helix 21
AC3
A
396 402Right-handed alpha
Helix 22
AC4
A
403 423Right-handed alpha
Helix 23
AC5
A
440 444Right-handed 310
Helix 24
AC6
A
464 475Right-handed alpha
Helix 25
AC7
B
11 15Right-handed 310
Helix 26
AC8
B
26 31Right-handed alpha
Helix 27
AC9
B
42 49Right-handed alpha
Helix 28
AD1
B
54 58Right-handed 310
Helix 29
AD2
B
65 80Right-handed alpha
Helix 30
AD3
B
90 95Right-handed alpha
Helix 31
AD4
B
103 120Right-handed alpha
Helix 32
AD5
B
134 142Right-handed alpha
Helix 33
AD6
B
143 147Right-handed 310
Helix 34
AD7
B
148 165Right-handed alpha
Helix 35
AD8
B
176 186Right-handed alpha
Helix 36
AD9
B
206 230Right-handed alpha
Helix 37
AE1
B
230 235Right-handed alpha
Helix 38
AE2
B
253 268Right-handed alpha
Helix 39
AE3
B
268 278Right-handed alpha
Helix 40
AE4
B
281 289Right-handed alpha
Helix 41
AE5
B
290 292Right-handed 310
Helix 42
AE6
B
296 304Right-handed alpha
Helix 43
AE7
B
334 338Right-handed 310
Helix 44
AE8
B
363 377Right-handed alpha
Helix 45
AE9
B
396 402Right-handed alpha
Helix 46
AF1
B
403 423Right-handed alpha
Helix 47
AF2
B
440 444Right-handed 310
Helix 48
AF3
B
464 475Right-handed alpha
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There are 10 sheets in PDB entry 7BZM. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
20 24first strand
Strand 2
A
84 88parallel
Strand 3
A
123 129parallel
Strand 4
A
170 175parallel
Strand 5
A
237 243parallel
Strand 6
A
310 313parallel
Strand 7
A
382 386parallel
Strand 8
A
427 433parallel
Strand 9
A
20 24parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
246 249first strand
Strand 2
A
317 321parallel
Strand 3
A
340 342anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
344 345first strand
Strand 2
A
348 349anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
391 392first strand
Strand 2
A
447 448anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
452 454first strand
Strand 2
A
461 463anti-parallel
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There are 9 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
20 24first strand
Strand 2
B
84 88parallel
Strand 3
B
123 129parallel
Strand 4
B
170 175parallel
Strand 5
B
237 243parallel
Strand 6
B
310 313parallel
Strand 7
B
382 386parallel
Strand 8
B
427 433parallel
Strand 9
B
20 24parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
246 249first strand
Strand 2
B
317 321parallel
Strand 3
B
340 342anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
344 345first strand
Strand 2
B
348 349anti-parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
391 392first strand
Strand 2
B
447 448anti-parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
452 454first strand
Strand 2
B
461 463anti-parallel
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