Analysis of interatomic Contacts of Structural Units in PDB entry:
7BZO

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7BZO entry

There are 4 chains in PDB entry 7BZO (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER 22	ASN 297
B	SER 10	GLN 255
C	GLY 1	LEU 239
D	ASN 29	ASN 69

There are 18 helices in PDB entry 7BZO. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	49	53	Right-handed 310
Helix 2	AA2	A	59	63	Right-handed 310
Helix 3	AA3	A	75	78	Right-handed 310
Helix 4	AA4	A	79	85	Right-handed alpha
Helix 5	AA5	A	117	123	Right-handed alpha
Helix 6	AA6	A	167	172	Right-handed 310
Helix 7	AA7	B	35	37	Right-handed 310
Helix 8	AA8	B	81	86	Right-handed alpha
Helix 9	AA9	B	89	99	Right-handed alpha
Helix 10	AB1	B	148	153	Right-handed alpha
Helix 11	AB2	B	172	179	Right-handed 310
Helix 12	AB3	C	42	46	Right-handed 310
Helix 13	AB4	C	63	68	Right-handed 310
Helix 14	AB5	C	92	96	Right-handed 310
Helix 15	AB6	C	98	103	Right-handed alpha
Helix 16	AB7	C	143	148	Right-handed alpha
Helix 17	AB8	D	35	39	Right-handed 310
Helix 18	AB9	D	49	53	Right-handed 310

There are 13 sheets in PDB entry 7BZO. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	24	25	first strand
Strand 2	D	47	48	anti-parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	91	96	first strand
Strand 2	A	245	252	anti-parallel
Strand 3	A	125	140	anti-parallel
Strand 4	A	187	191	anti-parallel
Strand 5	C	22	23	parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	200	201	first strand
Strand 2	A	125	140	anti-parallel
Strand 3	A	255	262	anti-parallel
Strand 4	C	39	40	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	105	109	first strand
Strand 2	A	231	236	anti-parallel
Strand 3	A	149	155	anti-parallel
Strand 4	A	177	181	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	14	18	first strand
Strand 2	B	21	25	anti-parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	32	33	first strand
Strand 2	B	191	196	parallel
Strand 3	B	106	111	anti-parallel
Strand 4	B	233	240	anti-parallel
Strand 5	B	64	65	anti-parallel

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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	32	33	first strand
Strand 2	B	191	196	parallel
Strand 3	B	106	111	anti-parallel
Strand 4	B	233	240	anti-parallel
Strand 5	B	69	71	anti-parallel

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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	159	160	first strand
Strand 2	B	78	79	anti-parallel
Strand 3	B	215	219	anti-parallel
Strand 4	B	121	126	anti-parallel
Strand 5	B	181	185	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	101	103	first strand
Strand 2	B	245	247	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	51	52	first strand
Strand 2	C	209	218	anti-parallel
Strand 3	C	69	72	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	51	52	first strand
Strand 2	C	209	218	anti-parallel
Strand 3	C	113	120	anti-parallel
Strand 4	C	162	167	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	80	85	first strand
Strand 2	C	191	195	anti-parallel
Strand 3	C	128	134	anti-parallel
Strand 4	C	151	156	anti-parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	176	177	first strand
Strand 2	C	106	110	anti-parallel
Strand 3	C	223	227	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7BZO

Analysis of interatomic Contacts of Structural Units in PDB entry:
7BZO