Analysis of interatomic Contacts of Structural Units in PDB entry:
7BZU

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7BZU entry

There are 5 chains in PDB entry 7BZU (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ALA 26	ASN 297
B	SER 10	GLN 255
C	GLY 1	LEU 239
D	PHE 27	ASN 69
E	PRO 30	LYS 322

There are 18 helices in PDB entry 7BZU. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	49	53	Right-handed 310
Helix 2	AA2	A	79	84	Right-handed alpha
Helix 3	AA3	A	115	123	Right-handed alpha
Helix 4	AA4	A	167	172	Right-handed 310
Helix 5	AA5	A	224	228	Right-handed 310
Helix 6	AA6	B	35	37	Right-handed 310
Helix 7	AA7	B	81	86	Right-handed alpha
Helix 8	AA8	B	89	98	Right-handed alpha
Helix 9	AA9	B	148	153	Right-handed alpha
Helix 10	AB1	B	163	167	Right-handed 310
Helix 11	AB2	C	43	48	Right-handed alpha
Helix 12	AB3	C	63	68	Right-handed 310
Helix 13	AB4	C	92	96	Right-handed 310
Helix 14	AB5	C	97	106	Right-handed alpha
Helix 15	AB6	C	143	148	Right-handed alpha
Helix 16	AB7	C	184	188	Right-handed 310
Helix 17	AB8	D	50	55	Right-handed alpha
Helix 18	AB9	E	143	153	Right-handed alpha

There are 17 sheets in PDB entry 7BZU. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	89	95	first strand
Strand 2	A	246	251	anti-parallel
Strand 3	A	135	140	anti-parallel
Strand 4	A	187	190	anti-parallel
Strand 5	C	22	23	parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	108	109	first strand
Strand 2	A	231	236	anti-parallel
Strand 3	A	149	155	anti-parallel
Strand 4	A	177	181	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	200	201	first strand
Strand 2	A	125	132	anti-parallel
Strand 3	A	254	262	anti-parallel
Strand 4	C	39	40	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	277	278	first strand
Strand 2	B	134	135	parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	14	18	first strand
Strand 2	B	21	25	anti-parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	32	33	first strand
Strand 2	B	194	196	parallel
Strand 3	B	106	111	anti-parallel
Strand 4	B	234	240	anti-parallel
Strand 5	B	69	70	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	64	65	first strand
Strand 2	B	234	240	anti-parallel
Strand 3	B	106	111	anti-parallel
Strand 4	B	191	192	anti-parallel

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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	159	160	first strand
Strand 2	B	78	79	anti-parallel
Strand 3	B	213	224	anti-parallel
Strand 4	B	119	128	anti-parallel
Strand 5	B	181	185	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	99	103	first strand
Strand 2	B	245	249	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	51	52	first strand
Strand 2	C	210	218	anti-parallel
Strand 3	C	69	71	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	51	52	first strand
Strand 2	C	210	218	anti-parallel
Strand 3	C	113	119	anti-parallel
Strand 4	C	162	167	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	80	85	first strand
Strand 2	C	191	201	anti-parallel
Strand 3	C	126	134	anti-parallel
Strand 4	C	151	156	anti-parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	176	177	first strand
Strand 2	C	108	110	anti-parallel
Strand 3	C	223	224	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	94	96	first strand
Strand 2	E	106	108	anti-parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	119	124	first strand
Strand 2	E	203	208	anti-parallel
Strand 3	E	158	161	anti-parallel

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There are 5 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	216	218	first strand
Strand 2	E	239	245	parallel
Strand 3	E	298	304	anti-parallel
Strand 4	E	267	272	anti-parallel
Strand 5	E	277	283	anti-parallel

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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	224	226	first strand
Strand 2	E	315	321	anti-parallel
Strand 3	E	251	255	anti-parallel
Strand 4	E	293	294	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7BZU

Analysis of interatomic Contacts of Structural Units in PDB entry:
7BZU