Analysis of interatomic Contacts of Structural Units in PDB entry:
7C04


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7C04 entry

There is 1 chain in PDB entry 7C04 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 71ASN 293
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 11 helices in PDB entry 7C04. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
93 106Right-handed alpha
Helix 2
AA2
A
107 109Right-handed 310
Helix 3
AA3
A
110 135Right-handed alpha
Helix 4
AA4
A
164 171Right-handed alpha
Helix 5
AA5
A
173 179Right-handed alpha
Helix 6
AA6
A
180 190Right-handed alpha
Helix 7
AA7
A
193 201Right-handed alpha
Helix 8
AA8
A
205 211Right-handed alpha
Helix 9
AA9
A
261 265Right-handed 310
Helix 10
AB1
A
266 275Right-handed alpha
Helix 11
AB2
A
276 281Right-handed 310
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There are 2 sheets in PDB entry 7C04. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
80 81first strand
Strand 2
A
238 245anti-parallel
Strand 3
A
86 89anti-parallel
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There are 9 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
80 81first strand
Strand 2
A
238 245anti-parallel
Strand 3
A
229 233anti-parallel
Strand 4
A
212 220anti-parallel
Strand 5
A
250 257anti-parallel
Strand 6
A
153 158anti-parallel
Strand 7
A
143 148anti-parallel
Strand 8
A
285 287parallel
Strand 9
A
290 291anti-parallel
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