Analysis of interatomic Contacts of Structural Units in PDB entry:
7C0D

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7C0D entry

There are 24 chains in PDB entry 7C0D (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	THR 6	PHE 170
A	ILE 172	HIS 309
B	THR 6	PHE 170
B	ILE 172	HIS 309
C	THR 6	PHE 170
C	ILE 172	ALA 308
D	THR 6	PHE 170
D	ILE 172	ALA 308
E	THR 6	PHE 170
E	ILE 172	ALA 308
F	THR 6	PHE 170
F	ILE 172	ALA 308
G	THR 6	PHE 170
G	ILE 172	ALA 308
H	THR 6	PHE 170
H	ILE 172	HIS 309
I	THR 6	PHE 170
I	ILE 172	TRP 307
J	PRO 7	PHE 170
J	ILE 172	ALA 308
K	PRO 7	PHE 170
K	ILE 172	ALA 308
L	THR 6	PHE 170
L	ILE 172	TRP 307

There are204 helices in PDB entry 7C0D. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	27	41	Right-handed alpha
Helix 2	AA2	A	50	58	Right-handed 310
Helix 3	AA3	A	59	75	Right-handed alpha
Helix 4	AA4	A	88	102	Right-handed alpha
Helix 5	AA5	A	121	136	Right-handed alpha
Helix 6	AA6	A	145	149	Right-handed 310
Helix 7	AA7	A	153	164	Right-handed alpha
Helix 8	AA8	A	176	189	Right-handed alpha
Helix 9	AA9	A	190	192	Right-handed 310
Helix 10	AB1	A	199	202	Right-handed 310
Helix 11	AB2	A	203	210	Right-handed alpha
Helix 12	AB3	A	221	234	Right-handed alpha
Helix 13	AB4	A	236	257	Right-handed alpha
Helix 14	AB5	A	258	260	Right-handed 310
Helix 15	AB6	A	261	270	Right-handed alpha
Helix 16	AB7	A	286	301	Right-handed alpha
Helix 17	AB8	A	302	306	Right-handed 310
Helix 18	AB9	B	27	41	Right-handed alpha
Helix 19	AC1	B	50	58	Right-handed 310
Helix 20	AC2	B	59	75	Right-handed alpha
Helix 21	AC3	B	88	103	Right-handed alpha
Helix 22	AC4	B	121	136	Right-handed alpha
Helix 23	AC5	B	145	149	Right-handed 310
Helix 24	AC6	B	153	164	Right-handed alpha
Helix 25	AC7	B	176	189	Right-handed alpha
Helix 26	AC8	B	190	192	Right-handed 310
Helix 27	AC9	B	199	202	Right-handed 310
Helix 28	AD1	B	203	210	Right-handed alpha
Helix 29	AD2	B	221	234	Right-handed alpha
Helix 30	AD3	B	236	257	Right-handed alpha
Helix 31	AD4	B	258	260	Right-handed 310
Helix 32	AD5	B	261	270	Right-handed alpha
Helix 33	AD6	B	286	299	Right-handed alpha
Helix 34	AD7	B	302	306	Right-handed 310
Helix 35	AD8	C	27	41	Right-handed alpha
Helix 36	AD9	C	50	58	Right-handed 310
Helix 37	AE1	C	59	75	Right-handed alpha
Helix 38	AE2	C	88	102	Right-handed alpha
Helix 39	AE3	C	121	136	Right-handed alpha
Helix 40	AE4	C	145	149	Right-handed 310
Helix 41	AE5	C	153	164	Right-handed alpha
Helix 42	AE6	C	176	189	Right-handed alpha
Helix 43	AE7	C	190	192	Right-handed 310
Helix 44	AE8	C	199	202	Right-handed 310
Helix 45	AE9	C	203	210	Right-handed alpha
Helix 46	AF1	C	221	234	Right-handed alpha
Helix 47	AF2	C	236	257	Right-handed alpha
Helix 48	AF3	C	258	260	Right-handed 310
Helix 49	AF4	C	261	270	Right-handed alpha
Helix 50	AF5	C	286	301	Right-handed alpha
Helix 51	AF6	C	302	306	Right-handed 310
Helix 52	AF7	D	27	41	Right-handed alpha
Helix 53	AF8	D	50	58	Right-handed 310
Helix 54	AF9	D	59	75	Right-handed alpha
Helix 55	AG1	D	88	102	Right-handed alpha
Helix 56	AG2	D	121	136	Right-handed alpha
Helix 57	AG3	D	145	149	Right-handed 310
Helix 58	AG4	D	153	164	Right-handed alpha
Helix 59	AG5	D	176	189	Right-handed alpha
Helix 60	AG6	D	190	192	Right-handed 310
Helix 61	AG7	D	199	202	Right-handed 310
Helix 62	AG8	D	203	210	Right-handed alpha
Helix 63	AG9	D	221	234	Right-handed alpha
Helix 64	AH1	D	236	257	Right-handed alpha
Helix 65	AH2	D	258	260	Right-handed 310
Helix 66	AH3	D	261	270	Right-handed alpha
Helix 67	AH4	D	286	301	Right-handed alpha
Helix 68	AH5	D	302	306	Right-handed 310
Helix 69	AH6	E	27	41	Right-handed alpha
Helix 70	AH7	E	50	58	Right-handed 310
Helix 71	AH8	E	59	75	Right-handed alpha
Helix 72	AH9	E	88	102	Right-handed alpha
Helix 73	AI1	E	121	136	Right-handed alpha
Helix 74	AI2	E	145	149	Right-handed 310
Helix 75	AI3	E	153	164	Right-handed alpha
Helix 76	AI4	E	176	189	Right-handed alpha
Helix 77	AI5	E	190	192	Right-handed 310
Helix 78	AI6	E	199	202	Right-handed 310
Helix 79	AI7	E	203	210	Right-handed alpha
Helix 80	AI8	E	221	234	Right-handed alpha
Helix 81	AI9	E	236	257	Right-handed alpha
Helix 82	AJ1	E	258	260	Right-handed 310
Helix 83	AJ2	E	261	270	Right-handed alpha
Helix 84	AJ3	E	286	301	Right-handed alpha
Helix 85	AJ4	E	302	306	Right-handed 310
Helix 86	AJ5	F	27	41	Right-handed alpha
Helix 87	AJ6	F	50	58	Right-handed 310
Helix 88	AJ7	F	59	75	Right-handed alpha
Helix 89	AJ8	F	88	102	Right-handed alpha
Helix 90	AJ9	F	121	136	Right-handed alpha
Helix 91	AK1	F	145	149	Right-handed 310
Helix 92	AK2	F	153	164	Right-handed alpha
Helix 93	AK3	F	176	189	Right-handed alpha
Helix 94	AK4	F	190	192	Right-handed 310
Helix 95	AK5	F	199	202	Right-handed 310
Helix 96	AK6	F	203	210	Right-handed alpha
Helix 97	AK7	F	221	234	Right-handed alpha
Helix 98	AK8	F	236	257	Right-handed alpha
Helix 99	AK9	F	258	260	Right-handed 310
Helix 100	AL1	F	261	270	Right-handed alpha
Helix 101	AL2	F	286	301	Right-handed alpha
Helix 102	AL3	F	302	306	Right-handed 310
Helix 103	AL4	G	27	41	Right-handed alpha
Helix 104	AL5	G	50	58	Right-handed 310
Helix 105	AL6	G	59	75	Right-handed alpha
Helix 106	AL7	G	88	102	Right-handed alpha
Helix 107	AL8	G	121	136	Right-handed alpha
Helix 108	AL9	G	145	149	Right-handed 310
Helix 109	AM1	G	153	164	Right-handed alpha
Helix 110	AM2	G	176	189	Right-handed alpha
Helix 111	AM3	G	190	192	Right-handed 310
Helix 112	AM4	G	199	202	Right-handed 310
Helix 113	AM5	G	203	210	Right-handed alpha
Helix 114	AM6	G	221	234	Right-handed alpha
Helix 115	AM7	G	236	257	Right-handed alpha
Helix 116	AM8	G	258	260	Right-handed 310
Helix 117	AM9	G	261	270	Right-handed alpha
Helix 118	AN1	G	286	301	Right-handed alpha
Helix 119	AN2	G	302	306	Right-handed 310
Helix 120	AN3	H	27	41	Right-handed alpha
Helix 121	AN4	H	50	58	Right-handed 310
Helix 122	AN5	H	59	75	Right-handed alpha
Helix 123	AN6	H	88	102	Right-handed alpha
Helix 124	AN7	H	121	136	Right-handed alpha
Helix 125	AN8	H	145	149	Right-handed 310
Helix 126	AN9	H	153	164	Right-handed alpha
Helix 127	AO1	H	176	189	Right-handed alpha
Helix 128	AO2	H	190	192	Right-handed 310
Helix 129	AO3	H	199	202	Right-handed 310
Helix 130	AO4	H	203	210	Right-handed alpha
Helix 131	AO5	H	221	234	Right-handed alpha
Helix 132	AO6	H	236	257	Right-handed alpha
Helix 133	AO7	H	258	260	Right-handed 310
Helix 134	AO8	H	261	270	Right-handed alpha
Helix 135	AO9	H	286	301	Right-handed alpha
Helix 136	AP1	H	302	306	Right-handed 310
Helix 137	AP2	I	27	41	Right-handed alpha
Helix 138	AP3	I	50	58	Right-handed 310
Helix 139	AP4	I	59	75	Right-handed alpha
Helix 140	AP5	I	88	102	Right-handed alpha
Helix 141	AP6	I	121	136	Right-handed alpha
Helix 142	AP7	I	145	149	Right-handed 310
Helix 143	AP8	I	153	164	Right-handed alpha
Helix 144	AP9	I	176	189	Right-handed alpha
Helix 145	AQ1	I	190	192	Right-handed 310
Helix 146	AQ2	I	199	202	Right-handed 310
Helix 147	AQ3	I	203	210	Right-handed alpha
Helix 148	AQ4	I	221	234	Right-handed alpha
Helix 149	AQ5	I	236	257	Right-handed alpha
Helix 150	AQ6	I	258	260	Right-handed 310
Helix 151	AQ7	I	261	270	Right-handed alpha
Helix 152	AQ8	I	286	301	Right-handed alpha
Helix 153	AQ9	I	302	306	Right-handed 310
Helix 154	AR1	J	27	41	Right-handed alpha
Helix 155	AR2	J	50	58	Right-handed 310
Helix 156	AR3	J	59	75	Right-handed alpha
Helix 157	AR4	J	88	103	Right-handed alpha
Helix 158	AR5	J	121	136	Right-handed alpha
Helix 159	AR6	J	145	149	Right-handed 310
Helix 160	AR7	J	153	164	Right-handed alpha
Helix 161	AR8	J	176	189	Right-handed alpha
Helix 162	AR9	J	190	192	Right-handed 310
Helix 163	AS1	J	199	202	Right-handed 310
Helix 164	AS2	J	203	210	Right-handed alpha
Helix 165	AS3	J	221	234	Right-handed alpha
Helix 166	AS4	J	236	257	Right-handed alpha
Helix 167	AS5	J	258	260	Right-handed 310
Helix 168	AS6	J	261	270	Right-handed alpha
Helix 169	AS7	J	286	301	Right-handed alpha
Helix 170	AS8	J	302	306	Right-handed 310
Helix 171	AS9	K	27	41	Right-handed alpha
Helix 172	AT1	K	50	58	Right-handed 310
Helix 173	AT2	K	59	75	Right-handed alpha
Helix 174	AT3	K	88	103	Right-handed alpha
Helix 175	AT4	K	121	136	Right-handed alpha
Helix 176	AT5	K	145	149	Right-handed 310
Helix 177	AT6	K	153	164	Right-handed alpha
Helix 178	AT7	K	176	189	Right-handed alpha
Helix 179	AT8	K	190	192	Right-handed 310
Helix 180	AT9	K	199	202	Right-handed 310
Helix 181	AU1	K	203	211	Right-handed alpha
Helix 182	AU2	K	221	234	Right-handed alpha
Helix 183	AU3	K	236	257	Right-handed alpha
Helix 184	AU4	K	258	260	Right-handed 310
Helix 185	AU5	K	261	270	Right-handed alpha
Helix 186	AU6	K	286	301	Right-handed alpha
Helix 187	AU7	K	302	306	Right-handed 310
Helix 188	AU8	L	27	41	Right-handed alpha
Helix 189	AU9	L	50	58	Right-handed 310
Helix 190	AV1	L	59	75	Right-handed alpha
Helix 191	AV2	L	88	102	Right-handed alpha
Helix 192	AV3	L	121	136	Right-handed alpha
Helix 193	AV4	L	145	149	Right-handed 310
Helix 194	AV5	L	153	164	Right-handed alpha
Helix 195	AV6	L	176	189	Right-handed alpha
Helix 196	AV7	L	190	192	Right-handed 310
Helix 197	AV8	L	199	202	Right-handed 310
Helix 198	AV9	L	203	211	Right-handed alpha
Helix 199	AW1	L	221	234	Right-handed alpha
Helix 200	AW2	L	236	257	Right-handed alpha
Helix 201	AW3	L	258	260	Right-handed 310
Helix 202	AW4	L	261	270	Right-handed alpha
Helix 203	AW5	L	286	301	Right-handed alpha
Helix 204	AW6	L	302	307	Right-handed 310

There are 12 sheets in PDB entry 7C0D. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	11	12	first strand
Strand 2	A	214	215	parallel
Strand 3	A	194	197	parallel
Strand 4	A	167	172	parallel
Strand 5	A	140	144	parallel
Strand 6	A	106	109	parallel
Strand 7	A	80	83	parallel
Strand 8	A	46	48	parallel

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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	11	12	first strand
Strand 2	B	214	215	parallel
Strand 3	B	194	197	parallel
Strand 4	B	167	172	parallel
Strand 5	B	140	144	parallel
Strand 6	B	106	109	parallel
Strand 7	B	80	83	parallel
Strand 8	B	46	48	parallel

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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	11	12	first strand
Strand 2	C	214	215	parallel
Strand 3	C	194	197	parallel
Strand 4	C	167	172	parallel
Strand 5	C	140	144	parallel
Strand 6	C	106	109	parallel
Strand 7	C	80	83	parallel
Strand 8	C	46	48	parallel

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There are 8 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	11	12	first strand
Strand 2	D	214	215	parallel
Strand 3	D	194	197	parallel
Strand 4	D	167	172	parallel
Strand 5	D	140	144	parallel
Strand 6	D	106	109	parallel
Strand 7	D	80	83	parallel
Strand 8	D	46	48	parallel

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There are 8 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	11	12	first strand
Strand 2	E	214	215	parallel
Strand 3	E	194	197	parallel
Strand 4	E	167	172	parallel
Strand 5	E	140	144	parallel
Strand 6	E	106	109	parallel
Strand 7	E	80	83	parallel
Strand 8	E	46	48	parallel

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There are 8 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	11	12	first strand
Strand 2	F	214	215	parallel
Strand 3	F	194	197	parallel
Strand 4	F	167	172	parallel
Strand 5	F	140	144	parallel
Strand 6	F	106	109	parallel
Strand 7	F	80	83	parallel
Strand 8	F	46	48	parallel

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There are 8 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	11	12	first strand
Strand 2	G	214	215	parallel
Strand 3	G	194	197	parallel
Strand 4	G	167	172	parallel
Strand 5	G	140	144	parallel
Strand 6	G	106	109	parallel
Strand 7	G	80	83	parallel
Strand 8	G	46	48	parallel

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There are 8 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	11	12	first strand
Strand 2	H	214	215	parallel
Strand 3	H	194	197	parallel
Strand 4	H	167	172	parallel
Strand 5	H	140	144	parallel
Strand 6	H	106	109	parallel
Strand 7	H	80	83	parallel
Strand 8	H	46	48	parallel

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There are 8 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	11	12	first strand
Strand 2	I	214	215	parallel
Strand 3	I	194	197	parallel
Strand 4	I	167	172	parallel
Strand 5	I	140	144	parallel
Strand 6	I	106	109	parallel
Strand 7	I	80	83	parallel
Strand 8	I	46	48	parallel

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There are 8 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	11	12	first strand
Strand 2	J	214	215	parallel
Strand 3	J	194	197	parallel
Strand 4	J	167	172	parallel
Strand 5	J	140	144	parallel
Strand 6	J	106	109	parallel
Strand 7	J	80	83	parallel
Strand 8	J	46	48	parallel

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There are 8 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	11	12	first strand
Strand 2	K	214	215	parallel
Strand 3	K	194	197	parallel
Strand 4	K	167	172	parallel
Strand 5	K	140	144	parallel
Strand 6	K	106	109	parallel
Strand 7	K	80	83	parallel
Strand 8	K	46	48	parallel

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There are 8 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	11	12	first strand
Strand 2	L	214	215	parallel
Strand 3	L	194	197	parallel
Strand 4	L	167	172	parallel
Strand 5	L	140	144	parallel
Strand 6	L	106	109	parallel
Strand 7	L	80	83	parallel
Strand 8	L	46	48	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7C0D

Analysis of interatomic Contacts of Structural Units in PDB entry:
7C0D