Analysis of interatomic Contacts of Structural Units in PDB entry:
7C1B


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7C1B entry

There is 1 chain in PDB entry 7C1B (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 3SER 369
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 19 helices in PDB entry 7C1B. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
3 13Right-handed alpha
Helix 2
AA2
A
25 43Right-handed alpha
Helix 3
AA3
A
56 62Right-handed alpha
Helix 4
AA4
A
68 73Right-handed 310
Helix 5
AA5
A
80 86Right-handed 310
Helix 6
AA6
A
109 115Right-handed alpha
Helix 7
AA7
A
122 138Right-handed alpha
Helix 8
AA8
A
147 157Right-handed alpha
Helix 9
AA9
A
172 188Right-handed alpha
Helix 10
AB1
A
198 203Right-handed alpha
Helix 11
AB2
A
217 225Right-handed alpha
Helix 12
AB3
A
259 275Right-handed alpha
Helix 13
AB4
A
275 287Right-handed alpha
Helix 14
AB5
A
293 297Right-handed 310
Helix 15
AB6
A
298 308Right-handed alpha
Helix 16
AB7
A
308 319Right-handed alpha
Helix 17
AB8
A
329 337Right-handed alpha
Helix 18
AB9
A
337 349Right-handed alpha
Helix 19
AC1
A
351 369Right-handed alpha
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There are 6 sheets in PDB entry 7C1B. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
15 21first strand
Strand 2
A
46 52parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
88 89first strand
Strand 2
A
92 93anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
210 214first strand
Strand 2
A
96 108anti-parallel
Strand 3
A
229 232anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
210 214first strand
Strand 2
A
96 108anti-parallel
Strand 3
A
245 252anti-parallel
Strand 4
A
321 322parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
142 144first strand
Strand 2
A
191 193parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
163 164first strand
Strand 2
A
167 168anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il