Analysis of interatomic Contacts of Structural Units in PDB entry:
7C1Y


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7C1Y entry

There are 2 chains in PDB entry 7C1Y (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1VAL 373
B
 MET 1MET 372
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 7C1Y. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
37 49Right-handed alpha
Helix 2
AA2
A
62 70Right-handed alpha
Helix 3
AA3
A
107 114Right-handed alpha
Helix 4
AA4
A
115 121Right-handed alpha
Helix 5
AA5
A
122 128Right-handed alpha
Helix 6
AA6
A
139 153Right-handed alpha
Helix 7
AA7
A
165 177Right-handed 310
Helix 8
AA8
A
183 196Right-handed alpha
Helix 9
AA9
A
211 229Right-handed alpha
Helix 10
AB1
A
239 241Right-handed 310
Helix 11
AB2
A
250 254Right-handed 310
Helix 12
AB3
A
265 275Right-handed alpha
Helix 13
AB4
A
308 323Right-handed alpha
Helix 14
AB5
A
326 343Right-handed alpha
Helix 15
AB6
A
353 368Right-handed alpha
Helix 16
AB7
B
37 49Right-handed alpha
Helix 17
AB8
B
62 70Right-handed alpha
Helix 18
AB9
B
108 114Right-handed alpha
Helix 19
AC1
B
115 121Right-handed alpha
Helix 20
AC2
B
122 129Right-handed alpha
Helix 21
AC3
B
139 152Right-handed alpha
Helix 22
AC4
B
165 177Right-handed 310
Helix 23
AC5
B
183 195Right-handed alpha
Helix 24
AC6
B
211 229Right-handed alpha
Helix 25
AC7
B
239 241Right-handed 310
Helix 26
AC8
B
308 323Right-handed alpha
Helix 27
AC9
B
326 343Right-handed alpha
Helix 28
AD1
B
353 367Right-handed alpha
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There are 3 sheets in PDB entry 7C1Y. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 10 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
79 82first strand
Strand 2
A
54 60parallel
Strand 3
A
4 6parallel
Strand 4
A
132 135parallel
Strand 5
A
157 160parallel
Strand 6
A
179 180parallel
Strand 7
A
233 237parallel
Strand 8
A
243 247anti-parallel
Strand 9
A
292 296anti-parallel
Strand 10
A
369 370anti-parallel
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There are 9 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
10 17first strand
Strand 2
A
26 36anti-parallel
Strand 3
B
100 106parallel
Strand 4
B
89 94anti-parallel
Strand 5
B
10 17parallel
Strand 6
B
26 36anti-parallel
Strand 7
A
100 106parallel
Strand 8
A
89 94anti-parallel
Strand 9
A
10 17parallel
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There are 10 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
79 82first strand
Strand 2
B
54 60parallel
Strand 3
B
4 6parallel
Strand 4
B
132 135parallel
Strand 5
B
157 160parallel
Strand 6
B
179 180parallel
Strand 7
B
233 237parallel
Strand 8
B
243 248anti-parallel
Strand 9
B
291 296anti-parallel
Strand 10
B
369 372anti-parallel
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