Analysis of interatomic Contacts of Structural Units in PDB entry:
7C5H

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7C5H entry

There are 4 chains in PDB entry 7C5H (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
O	MET 1	LEU 333
P	MET 1	LEU 333
Q	MET 1	LEU 333
R	MET 1	LEU 333

There are 58 helices in PDB entry 7C5H. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	O	10	23	Right-handed alpha
Helix 2	AA2	O	37	47	Right-handed alpha
Helix 3	AA3	O	79	83	Right-handed 310
Helix 4	AA4	O	102	107	Right-handed alpha
Helix 5	AA5	O	107	112	Right-handed alpha
Helix 6	AA6	O	134	138	Right-handed 310
Helix 7	AA7	O	149	167	Right-handed alpha
Helix 8	AA8	O	194	198	Right-handed 310
Helix 9	AA9	O	199	203	Right-handed 310
Helix 10	AB1	O	214	218	Right-handed 310
Helix 11	AB2	O	219	223	Right-handed 310
Helix 12	AB3	O	252	265	Right-handed alpha
Helix 13	AB4	O	278	283	Right-handed 310
Helix 14	AB5	O	294	296	Right-handed 310
Helix 15	AB6	O	316	331	Right-handed alpha
Helix 16	AB7	P	10	23	Right-handed alpha
Helix 17	AB8	P	37	47	Right-handed alpha
Helix 18	AB9	P	79	83	Right-handed 310
Helix 19	AC1	P	102	112	Right-handed alpha
Helix 20	AC2	P	134	138	Right-handed 310
Helix 21	AC3	P	149	167	Right-handed alpha
Helix 22	AC4	P	194	198	Right-handed 310
Helix 23	AC5	P	199	203	Right-handed 310
Helix 24	AC6	P	212	218	Right-handed 310
Helix 25	AC7	P	219	223	Right-handed 310
Helix 26	AC8	P	252	264	Right-handed alpha
Helix 27	AC9	P	278	283	Right-handed 310
Helix 28	AD1	P	294	296	Right-handed 310
Helix 29	AD2	P	316	333	Right-handed alpha
Helix 30	AD3	Q	10	23	Right-handed alpha
Helix 31	AD4	Q	37	47	Right-handed alpha
Helix 32	AD5	Q	79	83	Right-handed 310
Helix 33	AD6	Q	102	112	Right-handed alpha
Helix 34	AD7	Q	134	138	Right-handed 310
Helix 35	AD8	Q	149	167	Right-handed alpha
Helix 36	AD9	Q	194	198	Right-handed 310
Helix 37	AE1	Q	199	203	Right-handed 310
Helix 38	AE2	Q	214	218	Right-handed 310
Helix 39	AE3	Q	219	223	Right-handed 310
Helix 40	AE4	Q	252	265	Right-handed alpha
Helix 41	AE5	Q	278	283	Right-handed 310
Helix 42	AE6	Q	294	296	Right-handed 310
Helix 43	AE7	Q	316	332	Right-handed alpha
Helix 44	AE8	R	10	24	Right-handed alpha
Helix 45	AE9	R	37	47	Right-handed alpha
Helix 46	AF1	R	79	83	Right-handed 310
Helix 47	AF2	R	84	89	Right-handed alpha
Helix 48	AF3	R	102	112	Right-handed alpha
Helix 49	AF4	R	134	138	Right-handed 310
Helix 50	AF5	R	149	167	Right-handed alpha
Helix 51	AF6	R	194	198	Right-handed 310
Helix 52	AF7	R	199	203	Right-handed 310
Helix 53	AF8	R	212	218	Right-handed 310
Helix 54	AF9	R	219	223	Right-handed 310
Helix 55	AG1	R	252	265	Right-handed alpha
Helix 56	AG2	R	278	283	Right-handed 310
Helix 57	AG3	R	294	296	Right-handed 310
Helix 58	AG4	R	316	333	Right-handed alpha

There are 12 sheets in PDB entry 7C5H. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	O	58	61	first strand
Strand 2	O	64	67	anti-parallel
Strand 3	O	70	75	anti-parallel
Strand 4	O	28	33	parallel
Strand 5	O	3	7	parallel
Strand 6	O	92	95	parallel
Strand 7	O	116	119	parallel
Strand 8	O	144	146	parallel

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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	O	205	208	first strand
Strand 2	O	226	233	anti-parallel
Strand 3	O	168	178	parallel
Strand 4	O	239	247	anti-parallel
Strand 5	O	304	313	anti-parallel
Strand 6	O	289	292	anti-parallel
Strand 7	O	270	273	parallel

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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	O	205	208	first strand
Strand 2	O	226	233	anti-parallel
Strand 3	O	168	178	parallel
Strand 4	O	239	247	anti-parallel
Strand 5	O	304	313	anti-parallel
Strand 6	O	297	301	anti-parallel

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There are 8 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	58	61	first strand
Strand 2	P	64	67	anti-parallel
Strand 3	P	70	75	anti-parallel
Strand 4	P	28	33	parallel
Strand 5	P	3	7	parallel
Strand 6	P	92	95	parallel
Strand 7	P	116	119	parallel
Strand 8	P	144	146	parallel

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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	205	207	first strand
Strand 2	P	226	233	anti-parallel
Strand 3	P	168	178	parallel
Strand 4	P	239	247	anti-parallel
Strand 5	P	304	313	anti-parallel
Strand 6	P	289	292	anti-parallel
Strand 7	P	270	273	parallel

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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	205	207	first strand
Strand 2	P	226	233	anti-parallel
Strand 3	P	168	178	parallel
Strand 4	P	239	247	anti-parallel
Strand 5	P	304	313	anti-parallel
Strand 6	P	297	301	anti-parallel

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There are 8 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Q	58	61	first strand
Strand 2	Q	64	67	anti-parallel
Strand 3	Q	70	75	anti-parallel
Strand 4	Q	28	33	parallel
Strand 5	Q	3	7	parallel
Strand 6	Q	92	95	parallel
Strand 7	Q	116	119	parallel
Strand 8	Q	144	146	parallel

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There are 7 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Q	205	207	first strand
Strand 2	Q	226	233	anti-parallel
Strand 3	Q	168	178	parallel
Strand 4	Q	239	247	anti-parallel
Strand 5	Q	304	313	anti-parallel
Strand 6	Q	289	292	anti-parallel
Strand 7	Q	270	273	parallel

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There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Q	205	207	first strand
Strand 2	Q	226	233	anti-parallel
Strand 3	Q	168	178	parallel
Strand 4	Q	239	247	anti-parallel
Strand 5	Q	304	313	anti-parallel
Strand 6	Q	297	301	anti-parallel

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There are 8 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	R	58	61	first strand
Strand 2	R	64	67	anti-parallel
Strand 3	R	70	75	anti-parallel
Strand 4	R	28	33	parallel
Strand 5	R	3	7	parallel
Strand 6	R	92	95	parallel
Strand 7	R	116	119	parallel
Strand 8	R	144	146	parallel

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There are 7 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	R	205	207	first strand
Strand 2	R	226	233	anti-parallel
Strand 3	R	168	178	parallel
Strand 4	R	239	247	anti-parallel
Strand 5	R	304	313	anti-parallel
Strand 6	R	289	292	anti-parallel
Strand 7	R	270	273	parallel

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There are 6 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	R	205	207	first strand
Strand 2	R	226	233	anti-parallel
Strand 3	R	168	178	parallel
Strand 4	R	239	247	anti-parallel
Strand 5	R	304	313	anti-parallel
Strand 6	R	297	301	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7C5H

Analysis of interatomic Contacts of Structural Units in PDB entry:
7C5H