Analysis of interatomic Contacts of Structural Units in PDB entry:
7C6L


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7C6L entry

There are 2 chains in PDB entry 7C6L (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 2HIS 416
B
 LYS 2HIS 417
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 50 helices in PDB entry 7C6L. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
14 31Right-handed alpha
Helix 2
AA2
A
40 55Right-handed alpha
Helix 3
AA3
A
67 74Right-handed alpha
Helix 4
AA4
A
80 87Right-handed alpha
Helix 5
AA5
A
89 93Right-handed 310
Helix 6
AA6
A
94 99Right-handed alpha
Helix 7
AA7
A
100 102Right-handed 310
Helix 8
AA8
A
125 132Right-handed alpha
Helix 9
AA9
A
134 139Right-handed alpha
Helix 10
AB1
A
141 155Right-handed alpha
Helix 11
AB2
A
182 189Right-handed alpha
Helix 12
AB3
A
207 223Right-handed alpha
Helix 13
AB4
A
227 233Right-handed 310
Helix 14
AB5
A
234 244Right-handed alpha
Helix 15
AB6
A
254 260Right-handed alpha
Helix 16
AB7
A
261 262Right-handed 310
Helix 17
AB8
A
263 267Right-handed 310
Helix 18
AB9
A
272 277Right-handed alpha
Helix 19
AC1
A
307 320Right-handed alpha
Helix 20
AC2
A
320 332Right-handed alpha
Helix 21
AC3
A
337 342Right-handed 310
Helix 22
AC4
A
343 348Right-handed alpha
Helix 23
AC5
A
349 359Right-handed alpha
Helix 24
AC6
A
370 391Right-handed alpha
Helix 25
AC7
A
395 416Right-handed alpha
Helix 26
AC8
B
14 31Right-handed alpha
Helix 27
AC9
B
40 55Right-handed alpha
Helix 28
AD1
B
67 74Right-handed alpha
Helix 29
AD2
B
80 87Right-handed alpha
Helix 30
AD3
B
89 93Right-handed 310
Helix 31
AD4
B
94 99Right-handed alpha
Helix 32
AD5
B
100 102Right-handed 310
Helix 33
AD6
B
125 132Right-handed alpha
Helix 34
AD7
B
134 139Right-handed alpha
Helix 35
AD8
B
141 155Right-handed alpha
Helix 36
AD9
B
182 189Right-handed alpha
Helix 37
AE1
B
207 223Right-handed alpha
Helix 38
AE2
B
227 233Right-handed 310
Helix 39
AE3
B
234 244Right-handed alpha
Helix 40
AE4
B
254 260Right-handed alpha
Helix 41
AE5
B
261 262Right-handed 310
Helix 42
AE6
B
263 267Right-handed 310
Helix 43
AE7
B
272 276Right-handed 310
Helix 44
AE8
B
307 320Right-handed alpha
Helix 45
AE9
B
320 332Right-handed alpha
Helix 46
AF1
B
337 342Right-handed 310
Helix 47
AF2
B
343 348Right-handed alpha
Helix 48
AF3
B
349 359Right-handed alpha
Helix 49
AF4
B
370 391Right-handed alpha
Helix 50
AF5
B
395 416Right-handed alpha
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There are 8 sheets in PDB entry 7C6L. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
33 38first strand
Strand 2
A
3 8parallel
Strand 3
A
60 64parallel
Strand 4
A
292 301anti-parallel
Strand 5
A
112 118anti-parallel
Strand 6
A
334 335anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
33 38first strand
Strand 2
A
3 8parallel
Strand 3
A
60 64parallel
Strand 4
A
292 301anti-parallel
Strand 5
A
362 363parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
167 169first strand
Strand 2
A
247 252parallel
Strand 3
A
120 124anti-parallel
Strand 4
A
278 281anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
194 197first strand
Strand 2
A
200 203anti-parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
33 38first strand
Strand 2
B
3 8parallel
Strand 3
B
60 64parallel
Strand 4
B
292 301anti-parallel
Strand 5
B
112 118anti-parallel
Strand 6
B
334 335anti-parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
33 38first strand
Strand 2
B
3 8parallel
Strand 3
B
60 64parallel
Strand 4
B
292 301anti-parallel
Strand 5
B
362 363parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
167 169first strand
Strand 2
B
247 252parallel
Strand 3
B
120 124anti-parallel
Strand 4
B
278 281anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
194 197first strand
Strand 2
B
200 203anti-parallel
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