Analysis of interatomic Contacts of Structural Units in PDB entry:
7C6T


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7C6T entry

There is 1 chain in PDB entry 7C6T (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 3ARG 415
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 25 helices in PDB entry 7C6T. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
14 31Right-handed alpha
Helix 2
AA2
A
40 55Right-handed alpha
Helix 3
AA3
A
67 74Right-handed alpha
Helix 4
AA4
A
80 87Right-handed alpha
Helix 5
AA5
A
88 93Right-handed 310
Helix 6
AA6
A
94 99Right-handed alpha
Helix 7
AA7
A
100 102Right-handed 310
Helix 8
AA8
A
125 132Right-handed alpha
Helix 9
AA9
A
134 139Right-handed alpha
Helix 10
AB1
A
141 155Right-handed alpha
Helix 11
AB2
A
182 189Right-handed alpha
Helix 12
AB3
A
207 223Right-handed alpha
Helix 13
AB4
A
227 232Right-handed alpha
Helix 14
AB5
A
234 244Right-handed alpha
Helix 15
AB6
A
254 260Right-handed alpha
Helix 16
AB7
A
261 262Right-handed 310
Helix 17
AB8
A
263 267Right-handed 310
Helix 18
AB9
A
272 277Right-handed alpha
Helix 19
AC1
A
307 320Right-handed alpha
Helix 20
AC2
A
320 332Right-handed alpha
Helix 21
AC3
A
337 342Right-handed 310
Helix 22
AC4
A
343 348Right-handed alpha
Helix 23
AC5
A
349 359Right-handed alpha
Helix 24
AC6
A
370 390Right-handed alpha
Helix 25
AC7
A
395 415Right-handed alpha
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There are 4 sheets in PDB entry 7C6T. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
34 38first strand
Strand 2
A
4 8parallel
Strand 3
A
60 64parallel
Strand 4
A
292 301anti-parallel
Strand 5
A
112 118anti-parallel
Strand 6
A
334 335anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
34 38first strand
Strand 2
A
4 8parallel
Strand 3
A
60 64parallel
Strand 4
A
292 301anti-parallel
Strand 5
A
362 363parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
167 169first strand
Strand 2
A
247 252parallel
Strand 3
A
120 124anti-parallel
Strand 4
A
278 281anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
194 197first strand
Strand 2
A
200 203anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il