Analysis of interatomic Contacts of Structural Units in PDB entry:
7C71


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7C71 entry

There are 2 chains in PDB entry 7C71 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 2ARG 416
B
 LYS 2ARG 416
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 49 helices in PDB entry 7C71. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
14 31Right-handed alpha
Helix 2
AA2
A
40 55Right-handed alpha
Helix 3
AA3
A
67 74Right-handed alpha
Helix 4
AA4
A
80 87Right-handed alpha
Helix 5
AA5
A
88 93Right-handed 310
Helix 6
AA6
A
94 99Right-handed alpha
Helix 7
AA7
A
100 102Right-handed 310
Helix 8
AA8
A
125 131Right-handed alpha
Helix 9
AA9
A
134 139Right-handed alpha
Helix 10
AB1
A
141 155Right-handed alpha
Helix 11
AB2
A
178 190Right-handed alpha
Helix 12
AB3
A
208 224Right-handed alpha
Helix 13
AB4
A
228 234Right-handed 310
Helix 14
AB5
A
235 245Right-handed alpha
Helix 15
AB6
A
255 261Right-handed alpha
Helix 16
AB7
A
262 263Right-handed 310
Helix 17
AB8
A
264 268Right-handed 310
Helix 18
AB9
A
273 277Right-handed 310
Helix 19
AC1
A
308 321Right-handed alpha
Helix 20
AC2
A
321 333Right-handed alpha
Helix 21
AC3
A
338 343Right-handed 310
Helix 22
AC4
A
344 349Right-handed alpha
Helix 23
AC5
A
350 361Right-handed alpha
Helix 24
AC6
A
371 392Right-handed alpha
Helix 25
AC7
A
396 416Right-handed alpha
Helix 26
AC8
B
14 31Right-handed alpha
Helix 27
AC9
B
40 55Right-handed alpha
Helix 28
AD1
B
67 74Right-handed alpha
Helix 29
AD2
B
80 88Right-handed alpha
Helix 30
AD3
B
89 93Right-handed 310
Helix 31
AD4
B
94 100Right-handed alpha
Helix 32
AD5
B
125 131Right-handed alpha
Helix 33
AD6
B
134 139Right-handed alpha
Helix 34
AD7
B
141 155Right-handed alpha
Helix 35
AD8
B
178 190Right-handed alpha
Helix 36
AD9
B
208 224Right-handed alpha
Helix 37
AE1
B
228 234Right-handed 310
Helix 38
AE2
B
235 245Right-handed alpha
Helix 39
AE3
B
255 261Right-handed alpha
Helix 40
AE4
B
262 263Right-handed 310
Helix 41
AE5
B
264 268Right-handed 310
Helix 42
AE6
B
273 277Right-handed 310
Helix 43
AE7
B
308 321Right-handed alpha
Helix 44
AE8
B
321 333Right-handed alpha
Helix 45
AE9
B
338 343Right-handed 310
Helix 46
AF1
B
344 349Right-handed alpha
Helix 47
AF2
B
350 361Right-handed alpha
Helix 48
AF3
B
371 392Right-handed alpha
Helix 49
AF4
B
396 416Right-handed alpha
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There are 8 sheets in PDB entry 7C71. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
33 38first strand
Strand 2
A
3 8parallel
Strand 3
A
60 64parallel
Strand 4
A
293 302anti-parallel
Strand 5
A
112 118anti-parallel
Strand 6
A
335 336anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
33 38first strand
Strand 2
A
3 8parallel
Strand 3
A
60 64parallel
Strand 4
A
293 302anti-parallel
Strand 5
A
363 364parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
167 169first strand
Strand 2
A
248 253parallel
Strand 3
A
120 124anti-parallel
Strand 4
A
279 282anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
195 198first strand
Strand 2
A
201 204anti-parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
33 38first strand
Strand 2
B
3 8parallel
Strand 3
B
60 64parallel
Strand 4
B
293 302anti-parallel
Strand 5
B
112 118anti-parallel
Strand 6
B
335 336anti-parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
33 38first strand
Strand 2
B
3 8parallel
Strand 3
B
60 64parallel
Strand 4
B
293 302anti-parallel
Strand 5
B
363 364parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
167 169first strand
Strand 2
B
248 253parallel
Strand 3
B
120 124anti-parallel
Strand 4
B
279 282anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
195 198first strand
Strand 2
B
201 204anti-parallel
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