Analysis of interatomic Contacts of Structural Units in PDB entry:
7C7D


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7C7D entry

There are 2 chains in PDB entry 7C7D (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 53PRO 591
B
 ALA 53PRO 591
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 8 helices in PDB entry 7C7D. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
65 67Right-handed 310
Helix 2
AA2
A
83 91Right-handed 310
Helix 3
AA3
A
212 215Right-handed 310
Helix 4
AA4
A
224 235Right-handed alpha
Helix 5
AA5
B
65 67Right-handed 310
Helix 6
AA6
B
83 91Right-handed 310
Helix 7
AA7
B
212 215Right-handed 310
Helix 8
AA8
B
224 235Right-handed alpha
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There are 15 sheets in PDB entry 7C7D. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
59 63first strand
Strand 2
A
188 196anti-parallel
Strand 3
A
92 95anti-parallel
Strand 4
A
72 74anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
59 63first strand
Strand 2
A
188 196anti-parallel
Strand 3
A
109 117anti-parallel
Strand 4
A
163 173anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
68 69first strand
Strand 2
A
100 104anti-parallel
Strand 3
A
178 183anti-parallel
Strand 4
A
123 130anti-parallel
Strand 5
A
133 142anti-parallel
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There are 21 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
209 210first strand
Strand 2
A
238 242parallel
Strand 3
A
259 263parallel
Strand 4
A
286 289parallel
Strand 5
A
318 320parallel
Strand 6
A
341 343parallel
Strand 7
A
365 367parallel
Strand 8
A
392 394parallel
Strand 9
A
413 418parallel
Strand 10
A
447 453parallel
Strand 11
A
486 495parallel
Strand 12
A
456 458parallel
Strand 13
A
421 423parallel
Strand 14
A
397 399parallel
Strand 15
A
370 372parallel
Strand 16
A
346 348parallel
Strand 17
A
323 325parallel
Strand 18
A
292 294parallel
Strand 19
A
269 272parallel
Strand 20
A
245 248parallel
Strand 21
A
219 223parallel
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There are 14 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
209 210first strand
Strand 2
A
238 242parallel
Strand 3
A
259 263parallel
Strand 4
A
286 289parallel
Strand 5
A
318 320parallel
Strand 6
A
341 343parallel
Strand 7
A
365 367parallel
Strand 8
A
392 394parallel
Strand 9
A
413 418parallel
Strand 10
A
447 453parallel
Strand 11
A
486 495parallel
Strand 12
A
514 527parallel
Strand 13
A
538 550parallel
Strand 14
A
567 571parallel
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There are 11 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
277 279first strand
Strand 2
A
309 311parallel
Strand 3
A
331 333parallel
Strand 4
A
355 357parallel
Strand 5
A
379 382parallel
Strand 6
A
407 410parallel
Strand 7
A
432 435parallel
Strand 8
A
474 477parallel
Strand 9
A
502 505parallel
Strand 10
A
530 534parallel
Strand 11
A
553 557parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
462 463first strand
Strand 2
A
470 471anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
59 63first strand
Strand 2
B
188 196anti-parallel
Strand 3
B
92 95anti-parallel
Strand 4
B
72 74anti-parallel
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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
59 63first strand
Strand 2
B
188 196anti-parallel
Strand 3
B
109 117anti-parallel
Strand 4
B
163 173anti-parallel
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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
68 69first strand
Strand 2
B
100 104anti-parallel
Strand 3
B
178 183anti-parallel
Strand 4
B
123 130anti-parallel
Strand 5
B
133 134anti-parallel
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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
68 69first strand
Strand 2
B
100 104anti-parallel
Strand 3
B
178 183anti-parallel
Strand 4
B
123 130anti-parallel
Strand 5
B
139 142anti-parallel
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There are 21 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
209 210first strand
Strand 2
B
238 242parallel
Strand 3
B
259 263parallel
Strand 4
B
286 289parallel
Strand 5
B
318 320parallel
Strand 6
B
341 343parallel
Strand 7
B
365 367parallel
Strand 8
B
392 394parallel
Strand 9
B
416 418parallel
Strand 10
B
449 453parallel
Strand 11
B
486 495parallel
Strand 12
B
456 458parallel
Strand 13
B
421 423parallel
Strand 14
B
397 399parallel
Strand 15
B
370 374parallel
Strand 16
B
346 350parallel
Strand 17
B
323 325parallel
Strand 18
B
292 294parallel
Strand 19
B
269 272parallel
Strand 20
B
245 248parallel
Strand 21
B
219 223parallel
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There are 14 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
209 210first strand
Strand 2
B
238 242parallel
Strand 3
B
259 263parallel
Strand 4
B
286 289parallel
Strand 5
B
318 320parallel
Strand 6
B
341 343parallel
Strand 7
B
365 367parallel
Strand 8
B
392 394parallel
Strand 9
B
416 418parallel
Strand 10
B
449 453parallel
Strand 11
B
486 495parallel
Strand 12
B
514 527parallel
Strand 13
B
538 550parallel
Strand 14
B
567 571parallel
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There are 11 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
277 279first strand
Strand 2
B
309 311parallel
Strand 3
B
331 333parallel
Strand 4
B
355 357parallel
Strand 5
B
379 382parallel
Strand 6
B
407 410parallel
Strand 7
B
432 435parallel
Strand 8
B
474 477parallel
Strand 9
B
502 505parallel
Strand 10
B
530 534parallel
Strand 11
B
553 557parallel
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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
462 464first strand
Strand 2
B
469 471anti-parallel
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