Analysis of interatomic Contacts of Structural Units in PDB entry:
7C7M


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7C7M entry

There is 1 chain in PDB entry 7C7M (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 5ALA 263
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 11 helices in PDB entry 7C7M. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
5 29Right-handed alpha
Helix 2
AA2
A
32 48Right-handed alpha
Helix 3
AA3
A
49 59Right-handed alpha
Helix 4
AA4
A
62 95Right-handed alpha
Helix 5
AA5
A
108 114Right-handed 310
Helix 6
AA6
A
133 144Right-handed alpha
Helix 7
AA7
A
153 168Right-handed alpha
Helix 8
AA8
A
179 183Right-handed 310
Helix 9
AA9
A
185 189Right-handed 310
Helix 10
AB1
A
200 212Right-handed alpha
Helix 11
AB2
A
224 230Right-handed 310
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There is 1 sheet (AA1) in PDB entry 7C7M.

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
173 176first strand
Strand 2
A
146 150parallel
Strand 3
A
123 127parallel
Strand 4
A
191 194parallel
Strand 5
A
217 222parallel
Strand 6
A
256 262anti-parallel
Strand 7
A
242 248anti-parallel
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