Analysis of interatomic Contacts of Structural Units in PDB entry:
7C7X


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7C7X entry

There are 6 chains in PDB entry 7C7X (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
C
 GLY 22ILE 102
D
 VAL 58SER 147
E
 SER 18ASN 224
F
 GLU 21ASN 224
A
 GLY 22ILE 102
B
 ASN 57SER 147
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 31 helices in PDB entry 7C7X. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
C
26 37Right-handed alpha
Helix 2
AA2
C
45 63Right-handed alpha
Helix 3
AA3
C
65 73Right-handed alpha
Helix 4
AA4
C
79 90Right-handed alpha
Helix 5
AA5
C
90 98Right-handed alpha
Helix 6
AA6
D
61 73Right-handed alpha
Helix 7
AA7
D
79 108Right-handed alpha
Helix 8
AA8
D
114 126Right-handed alpha
Helix 9
AA9
D
127 144Right-handed alpha
Helix 10
AB1
E
19 75Right-handed alpha
Helix 11
AB2
E
79 88Right-handed alpha
Helix 12
AB3
E
88 93Right-handed alpha
Helix 13
AB4
E
96 103Right-handed alpha
Helix 14
AB5
E
104 106Right-handed 310
Helix 15
AB6
E
186 191Right-handed 310
Helix 16
AB7
E
207 212Right-handed alpha
Helix 17
AB8
F
22 75Right-handed alpha
Helix 18
AB9
F
79 88Right-handed alpha
Helix 19
AC1
F
96 103Right-handed alpha
Helix 20
AC2
F
104 106Right-handed 310
Helix 21
AC3
F
206 214Right-handed alpha
Helix 22
AC4
F
219 224Right-handed alpha
Helix 23
AC5
A
26 37Right-handed alpha
Helix 24
AC6
A
45 67Right-handed alpha
Helix 25
AC7
A
68 73Right-handed alpha
Helix 26
AC8
A
79 90Right-handed alpha
Helix 27
AC9
A
90 98Right-handed alpha
Helix 28
AD1
B
61 73Right-handed alpha
Helix 29
AD2
B
79 108Right-handed alpha
Helix 30
AD3
B
114 126Right-handed alpha
Helix 31
AD4
B
127 147Right-handed alpha
Back to top of page

There are 5 sheets in PDB entry 7C7X. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
77 78first strand
Strand 2
D
77 78parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
120 121first strand
Strand 2
E
140 143anti-parallel
Strand 3
E
151 154anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
125 126first strand
Strand 2
E
137 138anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
109 113first strand
Strand 2
F
120 125anti-parallel
Strand 3
F
140 143anti-parallel
Strand 4
F
152 154anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
77 78first strand
Strand 2
B
77 78parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il