Analysis of interatomic Contacts of Structural Units in PDB entry:
7C7Z


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7C7Z entry

There are 2 chains in PDB entry 7C7Z (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 42LEU 370
B
 ALA 47ALA 355
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 7C7Z. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
42 62Right-handed alpha
Helix 2
AA2
A
62 99Right-handed alpha
Helix 3
AA3
A
103 126Right-handed alpha
Helix 4
AA4
A
178 183Right-handed alpha
Helix 5
AA5
A
254 258Right-handed 310
Helix 6
AA6
A
295 309Right-handed alpha
Helix 7
AA7
A
313 370Right-handed alpha
Helix 8
AA8
B
48 99Right-handed alpha
Helix 9
AA9
B
103 126Right-handed alpha
Helix 10
AB1
B
178 183Right-handed alpha
Helix 11
AB2
B
215 219Right-handed 310
Helix 12
AB3
B
254 258Right-handed 310
Helix 13
AB4
B
295 309Right-handed alpha
Helix 14
AB5
B
313 354Right-handed alpha
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There are 12 sheets in PDB entry 7C7Z. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
146 148first strand
Strand 2
A
154 156anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
164 168first strand
Strand 2
A
171 174anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
186 187first strand
Strand 2
A
293 294anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
193 197first strand
Strand 2
A
285 290anti-parallel
Strand 3
A
224 230anti-parallel
Strand 4
A
236 242anti-parallel
Strand 5
A
246 249anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
207 208first strand
Strand 2
A
272 277anti-parallel
Strand 3
A
212 213anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
207 208first strand
Strand 2
A
272 277anti-parallel
Strand 3
A
266 269anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
146 148first strand
Strand 2
B
154 156anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
164 165first strand
Strand 2
B
173 174anti-parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
186 187first strand
Strand 2
B
293 294anti-parallel
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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
193 197first strand
Strand 2
B
285 290anti-parallel
Strand 3
B
224 230anti-parallel
Strand 4
B
236 242anti-parallel
Strand 5
B
246 249anti-parallel
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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
207 208first strand
Strand 2
B
272 277anti-parallel
Strand 3
B
212 213anti-parallel
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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
207 208first strand
Strand 2
B
272 277anti-parallel
Strand 3
B
266 269anti-parallel
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