Analysis of interatomic Contacts of Structural Units in PDB entry:
7C8K


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7C8K entry

There is 1 chain in PDB entry 7C8K (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 19ALA 614
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 7C8K. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
20 53Right-handed alpha
Helix 2
AA2
A
56 82Right-handed alpha
Helix 3
AA3
A
90 101Right-handed alpha
Helix 4
AA4
A
109 129Right-handed alpha
Helix 5
AA5
A
146 155Right-handed alpha
Helix 6
AA6
A
157 194Right-handed alpha
Helix 7
AA7
A
198 205Right-handed alpha
Helix 8
AA8
A
218 249Right-handed alpha
Helix 9
AA9
A
265 267Right-handed 310
Helix 10
AB1
A
275 279Right-handed 310
Helix 11
AB2
A
293 300Right-handed alpha
Helix 12
AB3
A
303 317Right-handed alpha
Helix 13
AB4
A
324 331Right-handed alpha
Helix 14
AB5
A
366 385Right-handed alpha
Helix 15
AB6
A
389 393Right-handed 310
Helix 16
AB7
A
399 413Right-handed alpha
Helix 17
AB8
A
414 420Right-handed alpha
Helix 18
AB9
A
431 447Right-handed alpha
Helix 19
AC1
A
449 466Right-handed alpha
Helix 20
AC2
A
469 471Right-handed 310
Helix 21
AC3
A
472 484Right-handed alpha
Helix 22
AC4
A
498 503Right-handed 310
Helix 23
AC5
A
505 509Right-handed 310
Helix 24
AC6
A
513 533Right-handed alpha
Helix 25
AC7
A
547 559Right-handed alpha
Helix 26
AC8
A
565 575Right-handed alpha
Helix 27
AC9
A
581 599Right-handed alpha
Helix 28
AD1
A
600 602Right-handed 310
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There are 3 sheets in PDB entry 7C8K. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
131 133first strand
Strand 2
A
141 143anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
262 263first strand
Strand 2
A
487 488parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
347 350first strand
Strand 2
A
356 359anti-parallel
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