Analysis of interatomic Contacts of Structural Units in PDB entry:
7CA5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7CA5 entry

There are 2 chains in PDB entry 7CA5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 165ARG 863
B
 SER 53ASN 750
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 49 helices in PDB entry 7CA5. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
184 202Right-handed alpha
Helix 2
AA2
A
221 234Right-handed alpha
Helix 3
AA3
A
247 261Right-handed alpha
Helix 4
AA4
A
271 276Right-handed 310
Helix 5
AA5
A
289 305Right-handed alpha
Helix 6
AA6
A
316 334Right-handed alpha
Helix 7
AA7
A
347 357Right-handed alpha
Helix 8
AA8
A
367 382Right-handed alpha
Helix 9
AA9
A
397 402Right-handed alpha
Helix 10
AB1
A
411 420Right-handed alpha
Helix 11
AB2
A
442 454Right-handed alpha
Helix 12
AB3
A
465 485Right-handed alpha
Helix 13
AB4
A
503 515Right-handed alpha
Helix 14
AB5
A
542 546Right-handed 310
Helix 15
AB6
A
588 590Right-handed 310
Helix 16
AB7
A
591 616Right-handed alpha
Helix 17
AB8
A
627 645Right-handed alpha
Helix 18
AB9
A
660 674Right-handed alpha
Helix 19
AC1
A
675 676Right-handed 310
Helix 20
AC2
A
677 680Right-handed 310
Helix 21
AC3
A
681 692Right-handed alpha
Helix 22
AC4
A
707 731Right-handed alpha
Helix 23
AC5
A
767 791Right-handed alpha
Helix 24
AC6
A
802 825Right-handed alpha
Helix 25
AC7
A
826 828Right-handed 310
Helix 26
AC8
A
830 834Right-handed 310
Helix 27
AC9
A
836 854Right-handed alpha
Helix 28
AD1
A
854 862Right-handed alpha
Helix 29
AD2
B
68 92Right-handed alpha
Helix 30
AD3
B
109 122Right-handed alpha
Helix 31
AD4
B
135 146Right-handed alpha
Helix 32
AD5
B
160 165Right-handed 310
Helix 33
AD6
B
178 180Right-handed 310
Helix 34
AD7
B
181 192Right-handed alpha
Helix 35
AD8
B
205 219Right-handed alpha
Helix 36
AD9
B
235 245Right-handed alpha
Helix 37
AE1
B
258 271Right-handed alpha
Helix 38
AE2
B
303 312Right-handed alpha
Helix 39
AE3
B
334 347Right-handed alpha
Helix 40
AE4
B
354 378Right-handed alpha
Helix 41
AE5
B
392 405Right-handed alpha
Helix 42
AE6
B
480 506Right-handed alpha
Helix 43
AE7
B
520 539Right-handed alpha
Helix 44
AE8
B
543 547Right-handed 310
Helix 45
AE9
B
552 584Right-handed alpha
Helix 46
AF1
B
593 619Right-handed alpha
Helix 47
AF2
B
654 678Right-handed alpha
Helix 48
AF3
B
689 712Right-handed alpha
Helix 49
AF4
B
719 750Right-handed alpha
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There are 8 sheets in PDB entry 7CA5. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
169 171first strand
Strand 2
A
210 212parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
174 175first strand
Strand 2
A
215 216parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
336 340first strand
Strand 2
A
308 313parallel
Strand 3
A
362 365parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
424 427first strand
Strand 2
A
537 541anti-parallel
Strand 3
A
548 552anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
58 62first strand
Strand 2
B
101 105parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
153 154first strand
Strand 2
B
172 173parallel
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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
279 282first strand
Strand 2
B
314 317parallel
Strand 3
B
427 432anti-parallel
Strand 4
B
435 442anti-parallel
Strand 5
B
449 450anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
417 418first strand
Strand 2
B
421 422anti-parallel
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