Analysis of interatomic Contacts of Structural Units in PDB entry:
7CB2


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7CB2 entry

There are 3 chains in PDB entry 7CB2 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ILE 466
B
 MET 1ILE 466
C
 MET 1ARG 366
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 88 helices in PDB entry 7CB2. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
11 24Right-handed alpha
Helix 2
AA2
A
34 45Right-handed alpha
Helix 3
AA3
A
55 62Right-handed alpha
Helix 4
AA4
A
76 87Right-handed alpha
Helix 5
AA5
A
88 90Right-handed 310
Helix 6
AA6
A
103 116Right-handed alpha
Helix 7
AA7
A
128 136Right-handed alpha
Helix 8
AA8
A
144 159Right-handed alpha
Helix 9
AA9
A
176 206Right-handed alpha
Helix 10
AB1
A
210 223Right-handed alpha
Helix 11
AB2
A
228 238Right-handed alpha
Helix 12
AB3
A
247 252Right-handed 310
Helix 13
AB4
A
261 273Right-handed alpha
Helix 14
AB5
A
276 291Right-handed alpha
Helix 15
AB6
A
291 300Right-handed alpha
Helix 16
AB7
A
312 347Right-handed alpha
Helix 17
AB8
A
351 359Right-handed alpha
Helix 18
AB9
A
368 380Right-handed alpha
Helix 19
AC1
A
385 388Right-handed 310
Helix 20
AC2
A
389 413Right-handed alpha
Helix 21
AC3
A
417 431Right-handed alpha
Helix 22
AC4
A
436 449Right-handed alpha
Helix 23
AC5
B
11 24Right-handed alpha
Helix 24
AC6
B
34 44Right-handed alpha
Helix 25
AC7
B
55 62Right-handed alpha
Helix 26
AC8
B
76 87Right-handed alpha
Helix 27
AC9
B
88 90Right-handed 310
Helix 28
AD1
B
103 116Right-handed alpha
Helix 29
AD2
B
128 136Right-handed alpha
Helix 30
AD3
B
144 159Right-handed alpha
Helix 31
AD4
B
176 206Right-handed alpha
Helix 32
AD5
B
210 223Right-handed alpha
Helix 33
AD6
B
228 238Right-handed alpha
Helix 34
AD7
B
247 252Right-handed 310
Helix 35
AD8
B
262 273Right-handed alpha
Helix 36
AD9
B
276 291Right-handed alpha
Helix 37
AE1
B
291 300Right-handed alpha
Helix 38
AE2
B
312 347Right-handed alpha
Helix 39
AE3
B
351 359Right-handed alpha
Helix 40
AE4
B
368 380Right-handed alpha
Helix 41
AE5
B
385 388Right-handed 310
Helix 42
AE6
B
389 414Right-handed alpha
Helix 43
AE7
B
417 431Right-handed alpha
Helix 44
AE8
B
436 449Right-handed alpha
Helix 45
AE9
C
11 23Right-handed alpha
Helix 46
AF1
C
34 45Right-handed alpha
Helix 47
AF2
C
55 61Right-handed alpha
Helix 48
AF3
C
76 87Right-handed alpha
Helix 49
AF4
C
88 90Right-handed 310
Helix 50
AF5
C
103 117Right-handed alpha
Helix 51
AF6
C
128 136Right-handed alpha
Helix 52
AF7
C
144 159Right-handed alpha
Helix 53
AF8
C
176 206Right-handed alpha
Helix 54
AF9
C
210 223Right-handed alpha
Helix 55
AG1
C
228 238Right-handed alpha
Helix 56
AG2
C
249 252Right-handed 310
Helix 57
AG3
C
261 273Right-handed alpha
Helix 58
AG4
C
276 291Right-handed alpha
Helix 59
AG5
C
291 300Right-handed alpha
Helix 60
AG6
C
312 346Right-handed alpha
Helix 61
AG7
C
351 359Right-handed alpha
Helix 62
AG8
C
369 380Right-handed alpha
Helix 63
AG9
C
385 388Right-handed 310
Helix 64
AH1
C
389 413Right-handed alpha
Helix 65
AH2
C
417 431Right-handed alpha
Helix 66
AH3
C
436 448Right-handed alpha
Helix 67
AH4
D
11 24Right-handed alpha
Helix 68
AH5
D
34 45Right-handed alpha
Helix 69
AH6
D
55 61Right-handed alpha
Helix 70
AH7
D
76 87Right-handed alpha
Helix 71
AH8
D
88 90Right-handed 310
Helix 72
AH9
D
103 116Right-handed alpha
Helix 73
AI1
D
128 136Right-handed alpha
Helix 74
AI2
D
144 159Right-handed alpha
Helix 75
AI3
D
176 206Right-handed alpha
Helix 76
AI4
D
210 223Right-handed alpha
Helix 77
AI5
D
228 238Right-handed alpha
Helix 78
AI6
D
247 252Right-handed 310
Helix 79
AI7
D
260 273Right-handed alpha
Helix 80
AI8
D
276 291Right-handed alpha
Helix 81
AI9
D
291 300Right-handed alpha
Helix 82
AJ1
D
312 347Right-handed alpha
Helix 83
AJ2
D
351 359Right-handed alpha
Helix 84
AJ3
D
369 380Right-handed alpha
Helix 85
AJ4
D
385 388Right-handed 310
Helix 86
AJ5
D
389 413Right-handed alpha
Helix 87
AJ6
D
417 431Right-handed alpha
Helix 88
AJ7
D
436 449Right-handed alpha
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There are 6 sheets in PDB entry 7CB2. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
50 52first strand
Strand 2
A
28 31parallel
Strand 3
A
5 8parallel
Strand 4
A
68 71parallel
Strand 5
A
95 98parallel
Strand 6
A
120 127parallel
Strand 7
A
138 142anti-parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
50 52first strand
Strand 2
B
28 31parallel
Strand 3
B
5 8parallel
Strand 4
B
68 71parallel
Strand 5
B
95 98parallel
Strand 6
B
120 127parallel
Strand 7
B
138 143anti-parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
50 52first strand
Strand 2
C
28 31parallel
Strand 3
C
5 8parallel
Strand 4
C
68 71parallel
Strand 5
C
95 98parallel
Strand 6
C
120 127parallel
Strand 7
C
138 143anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
241 242first strand
Strand 2
C
246 247anti-parallel
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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
50 52first strand
Strand 2
D
28 31parallel
Strand 3
D
5 8parallel
Strand 4
D
68 71parallel
Strand 5
D
95 98parallel
Strand 6
D
120 127parallel
Strand 7
D
138 142anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
452 453first strand
Strand 2
D
460 461anti-parallel
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