Analysis of interatomic Contacts of Structural Units in PDB entry:
7CBE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7CBE entry

There are 2 chains in PDB entry 7CBE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 2ILE 296
B
 PRO 2ILE 296
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 7CBE. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
10 18Right-handed alpha
Helix 2
AA2
A
46 59Right-handed alpha
Helix 3
AA3
A
83 88Right-handed alpha
Helix 4
AA4
A
91 96Right-handed alpha
Helix 5
AA5
A
114 118Right-handed 310
Helix 6
AA6
A
120 134Right-handed alpha
Helix 7
AA7
A
142 154Right-handed alpha
Helix 8
AA8
A
198 207Right-handed alpha
Helix 9
AA9
A
241 253Right-handed alpha
Helix 10
AB1
A
264 268Right-handed 310
Helix 11
AB2
A
277 292Right-handed alpha
Helix 12
AB3
B
10 17Right-handed alpha
Helix 13
AB4
B
46 59Right-handed alpha
Helix 14
AB5
B
81 88Right-handed alpha
Helix 15
AB6
B
91 96Right-handed alpha
Helix 16
AB7
B
114 118Right-handed 310
Helix 17
AB8
B
120 134Right-handed alpha
Helix 18
AB9
B
142 154Right-handed alpha
Helix 19
AC1
B
198 207Right-handed alpha
Helix 20
AC2
B
241 253Right-handed alpha
Helix 21
AC3
B
264 268Right-handed 310
Helix 22
AC4
B
277 292Right-handed alpha
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There are 4 sheets in PDB entry 7CBE. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
23 24first strand
Strand 2
A
3 5parallel
Strand 3
B
65 70parallel
Strand 4
B
89 90parallel
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There are 11 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
23 24first strand
Strand 2
A
3 5parallel
Strand 3
B
65 70parallel
Strand 4
B
36 41parallel
Strand 5
B
100 105parallel
Strand 6
B
135 141parallel
Strand 7
B
229 232parallel
Strand 8
B
219 223anti-parallel
Strand 9
B
209 214anti-parallel
Strand 10
B
159 172anti-parallel
Strand 11
B
186 195anti-parallel
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There are 10 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
89 90first strand
Strand 2
A
65 70parallel
Strand 3
A
36 41parallel
Strand 4
A
100 105parallel
Strand 5
A
135 141parallel
Strand 6
A
229 232parallel
Strand 7
A
219 223anti-parallel
Strand 8
A
209 214anti-parallel
Strand 9
A
159 172anti-parallel
Strand 10
A
186 195anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
89 90first strand
Strand 2
A
65 70parallel
Strand 3
B
3 5parallel
Strand 4
B
23 24parallel
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