Analysis of interatomic Contacts of Structural Units in PDB entry:
7CBP

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7CBP entry

There are 10 chains in PDB entry 7CBP (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
T	ALA 1	SER 75
U	ALA 1	SER 75
V	ALA 1	SER 75
Q	ILE 1	ALA 501
N	ILE 1	ALA 501
K	ILE 1	ALA 501
D	GLU 1	PRO 222
E	ASP 1	CYS 215
R	GLU 1	PRO 222
S	ASP 1	CYS 215

There are 54 helices in PDB entry 7CBP. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	T	6	11	Right-handed 310
Helix 2	AA2	T	27	39	Right-handed alpha
Helix 3	AA3	T	40	51	Right-handed alpha
Helix 4	AA4	T	58	71	Right-handed alpha
Helix 5	AA5	U	6	11	Right-handed 310
Helix 6	AA6	U	21	26	Right-handed alpha
Helix 7	AA7	U	28	39	Right-handed alpha
Helix 8	AA8	U	40	51	Right-handed alpha
Helix 9	AA9	U	58	71	Right-handed alpha
Helix 10	AB1	V	6	11	Right-handed 310
Helix 11	AB2	V	27	39	Right-handed alpha
Helix 12	AB3	V	40	51	Right-handed alpha
Helix 13	AB4	V	58	71	Right-handed alpha
Helix 14	AB5	Q	100	104	Right-handed 310
Helix 15	AB6	Q	131	133	Right-handed 310
Helix 16	AB7	Q	191	195	Right-handed 310
Helix 17	AB8	Q	197	199	Right-handed 310
Helix 18	AB9	Q	215	219	Right-handed alpha
Helix 19	AC1	Q	261	267	Right-handed alpha
Helix 20	AC2	Q	405	424	Right-handed alpha
Helix 21	AC3	Q	425	431	Right-handed 310
Helix 22	AC4	Q	440	452	Right-handed alpha
Helix 23	AC5	Q	461	478	Right-handed alpha
Helix 24	AC6	Q	488	496	Right-handed alpha
Helix 25	AC7	N	82	87	Right-handed 310
Helix 26	AC8	N	131	133	Right-handed 310
Helix 27	AC9	N	197	200	Right-handed 310
Helix 28	AD1	N	214	219	Right-handed alpha
Helix 29	AD2	N	238	241	Right-handed 310
Helix 30	AD3	N	261	267	Right-handed alpha
Helix 31	AD4	N	405	425	Right-handed alpha
Helix 32	AD5	N	426	431	Right-handed 310
Helix 33	AD6	N	440	454	Right-handed alpha
Helix 34	AD7	N	461	477	Right-handed alpha
Helix 35	AD8	N	485	500	Right-handed alpha
Helix 36	AD9	K	82	87	Right-handed 310
Helix 37	AE1	K	131	133	Right-handed 310
Helix 38	AE2	K	148	152	Right-handed 310
Helix 39	AE3	K	214	219	Right-handed alpha
Helix 40	AE4	K	238	241	Right-handed 310
Helix 41	AE5	K	261	267	Right-handed alpha
Helix 42	AE6	K	405	424	Right-handed alpha
Helix 43	AE7	K	425	431	Right-handed 310
Helix 44	AE8	K	441	455	Right-handed alpha
Helix 45	AE9	K	461	478	Right-handed alpha
Helix 46	AF1	K	481	484	Right-handed 310
Helix 47	AF2	K	485	500	Right-handed alpha
Helix 48	AF3	D	62	65	Right-handed 310
Helix 49	AF4	D	87	91	Right-handed 310
Helix 50	AF5	E	122	129	Right-handed alpha
Helix 51	AF6	E	183	189	Right-handed alpha
Helix 52	AF7	R	87	91	Right-handed 310
Helix 53	AF8	S	123	129	Right-handed alpha
Helix 54	AF9	S	183	189	Right-handed alpha

There are 57 sheets in PDB entry 7CBP. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8, AE9, AF1, AF2, AF3, AF4, AF5, AF6, AF7, AF8, AF9, AG1, AG2, AG3,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Q	9	12	first strand
Strand 2	Q	30	33	parallel
Strand 3	Q	41	50	anti-parallel
Strand 4	Q	135	143	anti-parallel
Strand 5	Q	164	169	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Q	9	12	first strand
Strand 2	Q	30	33	parallel
Strand 3	Q	41	50	anti-parallel
Strand 4	Q	282	284	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Q	20	23	first strand
Strand 2	Q	291	294	anti-parallel
Strand 3	Q	184	189	anti-parallel
Strand 4	Q	175	180	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Q	60	65	first strand
Strand 2	Q	112	124	anti-parallel
Strand 3	Q	69	73	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Q	60	65	first strand
Strand 2	Q	112	124	anti-parallel
Strand 3	Q	90	95	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Q	98	99	first strand
Strand 2	Q	109	110	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Q	126	129	first strand
Strand 2	Q	201	205	anti-parallel
Strand 3	Q	210	214	anti-parallel
Strand 4	Q	273	275	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Q	243	247	first strand
Strand 2	Q	253	257	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Q	306	307	first strand
Strand 2	Q	339	340	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Q	312	313	first strand
Strand 2	Q	326	333	anti-parallel
Strand 3	Q	319	320	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Q	312	313	first strand
Strand 2	Q	326	333	anti-parallel
Strand 3	Q	371	378	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Q	344	346	first strand
Strand 2	Q	383	388	anti-parallel
Strand 3	Q	399	402	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	9	13	first strand
Strand 2	N	30	34	parallel
Strand 3	N	41	50	anti-parallel
Strand 4	N	135	143	anti-parallel
Strand 5	N	164	169	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	9	13	first strand
Strand 2	N	30	34	parallel
Strand 3	N	41	50	anti-parallel
Strand 4	N	282	284	anti-parallel
Strand 5	N	274	277	anti-parallel
Strand 6	N	210	211	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	20	23	first strand
Strand 2	N	291	294	anti-parallel
Strand 3	N	184	189	anti-parallel
Strand 4	N	175	180	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	123	124	first strand
Strand 2	N	58	62	anti-parallel
Strand 3	N	225	226	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	69	72	first strand
Strand 2	N	109	118	anti-parallel
Strand 3	N	90	91	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	69	72	first strand
Strand 2	N	109	118	anti-parallel
Strand 3	N	94	99	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	126	129	first strand
Strand 2	N	202	205	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	243	247	first strand
Strand 2	N	253	257	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	306	307	first strand
Strand 2	N	339	340	parallel
Strand 3	N	364	365	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	312	313	first strand
Strand 2	N	329	333	anti-parallel
Strand 3	N	371	375	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	319	320	first strand
Strand 2	N	326	327	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	344	346	first strand
Strand 2	N	383	388	anti-parallel
Strand 3	N	399	402	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	9	13	first strand
Strand 2	K	30	34	parallel
Strand 3	K	41	51	anti-parallel
Strand 4	K	135	143	anti-parallel
Strand 5	K	164	169	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	9	13	first strand
Strand 2	K	30	34	parallel
Strand 3	K	41	51	anti-parallel
Strand 4	K	281	284	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	20	23	first strand
Strand 2	K	291	294	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	54	55	first strand
Strand 2	K	126	129	anti-parallel
Strand 3	K	202	205	anti-parallel
Strand 4	K	210	212	anti-parallel
Strand 5	K	273	275	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	90	95	first strand
Strand 2	K	112	124	anti-parallel
Strand 3	K	58	73	anti-parallel
Strand 4	K	225	226	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	98	99	first strand
Strand 2	K	109	110	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	175	180	first strand
Strand 2	K	184	189	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	243	247	first strand
Strand 2	K	253	257	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	312	314	first strand
Strand 2	K	326	333	anti-parallel
Strand 3	K	319	320	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	312	314	first strand
Strand 2	K	326	333	anti-parallel
Strand 3	K	371	378	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	344	345	first strand
Strand 2	K	384	388	anti-parallel
Strand 3	K	397	401	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	4	6	first strand
Strand 2	D	22	24	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	17	20	first strand
Strand 2	D	81	84	anti-parallel
Strand 3	D	68	69	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	58	60	first strand
Strand 2	D	47	51	anti-parallel
Strand 3	D	32	37	anti-parallel
Strand 4	D	97	100	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	72	73	first strand
Strand 2	D	78	79	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	92	94	first strand
Strand 2	D	116	118	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	151	154	first strand
Strand 2	D	185	187	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	160	161	first strand
Strand 2	D	207	208	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	6	7	first strand
Strand 2	E	22	23	anti-parallel
Strand 3	E	71	75	anti-parallel
Strand 4	E	62	64	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AE8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	12	13	first strand
Strand 2	E	106	107	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AE9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	45	49	first strand
Strand 2	E	34	38	anti-parallel
Strand 3	E	85	87	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AF1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	135	138	first strand
Strand 2	E	175	178	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AF2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	149	150	first strand
Strand 2	E	155	156	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AF3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	R	3	7	first strand
Strand 2	R	19	25	anti-parallel
Strand 3	R	81	83	anti-parallel
Strand 4	R	68	69	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AF4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	R	10	12	first strand
Strand 2	R	117	120	parallel
Strand 3	R	92	93	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AF5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	R	58	60	first strand
Strand 2	R	45	51	anti-parallel
Strand 3	R	32	39	anti-parallel
Strand 4	R	97	100	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AF6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	R	72	73	first strand
Strand 2	R	78	79	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AF7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	R	151	154	first strand
Strand 2	R	185	187	anti-parallel
Strand 3	R	178	179	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AF8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	R	160	162	first strand
Strand 2	R	206	208	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AF9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	S	5	7	first strand
Strand 2	S	22	24	anti-parallel
Strand 3	S	70	75	anti-parallel
Strand 4	S	62	67	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AG1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	S	53	54	first strand
Strand 2	S	45	49	anti-parallel
Strand 3	S	34	38	anti-parallel
Strand 4	S	85	88	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AG2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	S	135	138	first strand
Strand 2	S	175	178	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AG3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	S	149	150	first strand
Strand 2	S	155	156	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7CBP

Analysis of interatomic Contacts of Structural Units in PDB entry:
7CBP