Analysis of interatomic Contacts of Structural Units in PDB entry:
7CBS


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7CBS entry

There are 8 chains in PDB entry 7CBS (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
ALA 31ASN 183
B
ALA 32ASN 183
C
ALA 32ASN 183
D
THR 33ASN 183
E
VAL 34ASN 183
G
THR 33ASN 183
F
THR 33PRO 181
L
THR 33ASN 183
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 30 helices in PDB entry 7CBS. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
82 94Right-handed alpha
Helix 2
AA2
A
96 105Right-handed alpha
Helix 3
AA3
A
112 114Right-handed 310
Helix 4
AA4
A
166 171Right-handed alpha
Helix 5
AA5
B
82 94Right-handed alpha
Helix 6
AA6
B
96 105Right-handed alpha
Helix 7
AA7
B
112 114Right-handed 310
Helix 8
AA8
B
166 171Right-handed alpha
Helix 9
AA9
C
82 94Right-handed alpha
Helix 10
AB1
C
96 105Right-handed alpha
Helix 11
AB2
C
112 114Right-handed 310
Helix 12
AB3
C
166 171Right-handed alpha
Helix 13
AB4
D
82 94Right-handed alpha
Helix 14
AB5
D
96 105Right-handed alpha
Helix 15
AB6
D
166 171Right-handed alpha
Helix 16
AB7
E
82 94Right-handed alpha
Helix 17
AB8
E
96 105Right-handed alpha
Helix 18
AB9
E
112 114Right-handed 310
Helix 19
AC1
E
166 171Right-handed alpha
Helix 20
AC2
G
82 94Right-handed alpha
Helix 21
AC3
G
96 105Right-handed alpha
Helix 22
AC4
G
166 171Right-handed alpha
Helix 23
AC5
F
82 91Right-handed alpha
Helix 24
AC6
F
96 105Right-handed alpha
Helix 25
AC7
F
112 114Right-handed 310
Helix 26
AC8
F
166 172Right-handed alpha
Helix 27
AC9
L
82 94Right-handed alpha
Helix 28
AD1
L
96 105Right-handed alpha
Helix 29
AD2
L
112 114Right-handed 310
Helix 30
AD3
L
166 171Right-handed alpha
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There are 24 sheets in PDB entry 7CBS. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
127 134first strand
Strand 2
A
37 43anti-parallel
Strand 3
A
176 179parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
116 121first strand
Strand 2
A
76 81anti-parallel
Strand 3
A
143 150anti-parallel
Strand 4
A
161 164anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
136 137first strand
Strand 2
A
140 141anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
127 134first strand
Strand 2
B
37 43anti-parallel
Strand 3
B
176 179parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
116 121first strand
Strand 2
B
76 81anti-parallel
Strand 3
B
143 150anti-parallel
Strand 4
B
161 164anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
136 137first strand
Strand 2
B
140 141anti-parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
127 134first strand
Strand 2
C
37 43anti-parallel
Strand 3
C
176 179parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
116 121first strand
Strand 2
C
76 81anti-parallel
Strand 3
C
143 150anti-parallel
Strand 4
C
161 164anti-parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
136 137first strand
Strand 2
C
140 141anti-parallel
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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
127 134first strand
Strand 2
D
37 43anti-parallel
Strand 3
D
176 179parallel
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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
116 121first strand
Strand 2
D
76 81anti-parallel
Strand 3
D
143 150anti-parallel
Strand 4
D
161 164anti-parallel
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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
136 137first strand
Strand 2
D
140 141anti-parallel
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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
127 134first strand
Strand 2
E
37 43anti-parallel
Strand 3
E
176 179parallel
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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
116 121first strand
Strand 2
E
76 81anti-parallel
Strand 3
E
143 150anti-parallel
Strand 4
E
161 164anti-parallel
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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
136 137first strand
Strand 2
E
140 141anti-parallel
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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
127 134first strand
Strand 2
G
37 43anti-parallel
Strand 3
G
176 179parallel
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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
116 121first strand
Strand 2
G
76 81anti-parallel
Strand 3
G
143 150anti-parallel
Strand 4
G
161 164anti-parallel
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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
136 137first strand
Strand 2
G
140 141anti-parallel
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There are 3 strands in AC1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
127 134first strand
Strand 2
F
37 43anti-parallel
Strand 3
F
176 179parallel
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There are 3 strands in AC2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
116 120first strand
Strand 2
F
77 81anti-parallel
Strand 3
F
144 147anti-parallel
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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
136 137first strand
Strand 2
F
140 141anti-parallel
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There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
L
127 134first strand
Strand 2
L
37 43anti-parallel
Strand 3
L
176 179parallel
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There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
L
116 121first strand
Strand 2
L
76 81anti-parallel
Strand 3
L
143 148anti-parallel
Strand 4
L
161 164anti-parallel
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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
L
136 137first strand
Strand 2
L
140 141anti-parallel
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