Analysis of interatomic Contacts of Structural Units in PDB entry:
7CCB


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7CCB entry

There are 2 chains in PDB entry 7CCB (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 27LEU 190
B
 ALA 27LEU 190
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There is 1 helix in PDB entry 7CCB. Click on helix number for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
119 123Right-handed 310
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There are 6 sheets in PDB entry 7CCB. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
30 35first strand
Strand 2
A
47 56anti-parallel
Strand 3
A
170 174anti-parallel
Strand 4
A
65 73anti-parallel
Strand 5
A
129 134anti-parallel
Strand 6
A
138 143anti-parallel
Strand 7
A
152 153anti-parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
38 42first strand
Strand 2
A
47 56anti-parallel
Strand 3
A
160 166anti-parallel
Strand 4
A
76 82anti-parallel
Strand 5
A
99 103anti-parallel
Strand 6
A
107 110anti-parallel
Strand 7
A
113 117anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
146 147first strand
Strand 2
A
138 143anti-parallel
Strand 3
A
152 153anti-parallel
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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
30 35first strand
Strand 2
B
47 56anti-parallel
Strand 3
B
170 174anti-parallel
Strand 4
B
65 73anti-parallel
Strand 5
B
129 134anti-parallel
Strand 6
B
138 143anti-parallel
Strand 7
B
152 153anti-parallel
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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
38 42first strand
Strand 2
B
47 56anti-parallel
Strand 3
B
160 166anti-parallel
Strand 4
B
76 82anti-parallel
Strand 5
B
99 103anti-parallel
Strand 6
B
107 110anti-parallel
Strand 7
B
113 117anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
146 147first strand
Strand 2
B
138 143anti-parallel
Strand 3
B
152 153anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il