Analysis of interatomic Contacts of Structural Units in PDB entry:
7CCC


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7CCC entry

There are 6 chains in PDB entry 7CCC (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
THR 5GLU 72
A
GLY 74VAL 370
B
MET 1PRO 342
C
VAL 8SER 276
D
SER 2PHE 249
E
THR 5VAL 54
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 71 helices in PDB entry 7CCC. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
55 61Right-handed alpha
Helix 2
AA2
A
78 92Right-handed alpha
Helix 3
AA3
A
97 101Right-handed 310
Helix 4
AA4
A
112 126Right-handed alpha
Helix 5
AA5
A
137 145Right-handed alpha
Helix 6
AA6
A
172 175Right-handed 310
Helix 7
AA7
A
181 197Right-handed alpha
Helix 8
AA8
A
202 217Right-handed alpha
Helix 9
AA9
A
222 233Right-handed alpha
Helix 10
AB1
A
252 257Right-handed alpha
Helix 11
AB2
A
258 262Right-handed 310
Helix 12
AB3
A
263 268Right-handed 310
Helix 13
AB4
A
273 284Right-handed alpha
Helix 14
AB5
A
286 295Right-handed alpha
Helix 15
AB6
A
301 305Right-handed 310
Helix 16
AB7
A
308 321Right-handed alpha
Helix 17
AB8
A
334 336Right-handed 310
Helix 18
AB9
A
337 349Right-handed alpha
Helix 19
AC1
A
349 356Right-handed alpha
Helix 20
AC2
A
359 366Right-handed alpha
Helix 21
AC3
B
10 21Right-handed alpha
Helix 22
AC4
B
48 58Right-handed alpha
Helix 23
AC5
B
59 61Right-handed 310
Helix 24
AC6
B
94 104Right-handed alpha
Helix 25
AC7
B
104 113Right-handed alpha
Helix 26
AC8
B
125 130Right-handed alpha
Helix 27
AC9
B
130 142Right-handed alpha
Helix 28
AD1
B
148 167Right-handed alpha
Helix 29
AD2
B
170 174Right-handed 310
Helix 30
AD3
B
183 195Right-handed alpha
Helix 31
AD4
B
224 229Right-handed 310
Helix 32
AD5
B
265 287Right-handed alpha
Helix 33
AD6
B
299 303Right-handed 310
Helix 34
AD7
B
304 313Right-handed alpha
Helix 35
AD8
C
9 23Right-handed alpha
Helix 36
AD9
C
28 41Right-handed alpha
Helix 37
AE1
C
42 50Right-handed alpha
Helix 38
AE2
C
50 61Right-handed alpha
Helix 39
AE3
C
117 136Right-handed alpha
Helix 40
AE4
C
220 253Right-handed alpha
Helix 41
AE5
C
253 259Right-handed alpha
Helix 42
AE6
C
270 275Right-handed alpha
Helix 43
AE7
D
3 16Right-handed alpha
Helix 44
AE8
D
17 19Right-handed 310
Helix 45
AE9
D
20 32Right-handed alpha
Helix 46
AF1
D
35 43Right-handed alpha
Helix 47
AF2
D
90 112Right-handed alpha
Helix 48
AF3
D
208 231Right-handed alpha
Helix 49
AF4
D
231 244Right-handed alpha
Helix 50
AF5
E
55 61Right-handed alpha
Helix 51
AF6
E
71 75Right-handed 310
Helix 52
AF7
E
78 92Right-handed alpha
Helix 53
AF8
E
97 101Right-handed 310
Helix 54
AF9
E
112 125Right-handed alpha
Helix 55
AG1
E
137 144Right-handed alpha
Helix 56
AG2
E
172 175Right-handed 310
Helix 57
AG3
E
181 197Right-handed alpha
Helix 58
AG4
E
202 217Right-handed alpha
Helix 59
AG5
E
222 233Right-handed alpha
Helix 60
AG6
E
251 256Right-handed 310
Helix 61
AG7
E
257 262Right-handed 310
Helix 62
AG8
E
263 268Right-handed 310
Helix 63
AG9
E
273 283Right-handed alpha
Helix 64
AH1
E
289 296Right-handed alpha
Helix 65
AH2
E
301 305Right-handed 310
Helix 66
AH3
E
308 321Right-handed alpha
Helix 67
AH4
E
334 336Right-handed 310
Helix 68
AH5
E
337 348Right-handed alpha
Helix 69
AH6
E
349 354Right-handed alpha
Helix 70
AH7
E
359 366Right-handed alpha
Helix 71
AH8
E
367 370Right-handed 310
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There are 17 sheets in PDB entry 7CCC. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
29 32first strand
Strand 2
A
16 21anti-parallel
Strand 3
A
8 12anti-parallel
Strand 4
A
103 107parallel
Strand 5
A
131 136parallel
Strand 6
A
357 358anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
53 54first strand
Strand 2
A
35 38anti-parallel
Strand 3
A
65 68anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
169 170first strand
Strand 2
A
160 166anti-parallel
Strand 3
A
176 178anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
169 170first strand
Strand 2
A
160 166anti-parallel
Strand 3
A
150 155anti-parallel
Strand 4
A
297 300parallel
Strand 5
A
329 330parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
238 241first strand
Strand 2
A
247 250anti-parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
36 43first strand
Strand 2
B
27 33anti-parallel
Strand 3
B
67 76anti-parallel
Strand 4
B
81 88anti-parallel
Strand 5
B
117 123parallel
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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
211 216first strand
Strand 2
B
200 206anti-parallel
Strand 3
B
235 245anti-parallel
Strand 4
B
248 258anti-parallel
Strand 5
B
291 297parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
64 65first strand
Strand 2
C
74 75anti-parallel
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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
86 89first strand
Strand 2
C
94 99anti-parallel
Strand 3
C
104 110anti-parallel
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There are 10 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
139 148first strand
Strand 2
C
151 164anti-parallel
Strand 3
C
169 180anti-parallel
Strand 4
C
186 198anti-parallel
Strand 5
C
202 216anti-parallel
Strand 6
D
185 202anti-parallel
Strand 7
D
164 181anti-parallel
Strand 8
D
145 158anti-parallel
Strand 9
D
128 137anti-parallel
Strand 10
D
116 123anti-parallel
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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
48 51first strand
Strand 2
D
58 61anti-parallel
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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
66 67first strand
Strand 2
D
70 72anti-parallel
Strand 3
D
79 80anti-parallel
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There are 6 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
29 32first strand
Strand 2
E
16 21anti-parallel
Strand 3
E
8 12anti-parallel
Strand 4
E
103 107parallel
Strand 5
E
131 136parallel
Strand 6
E
357 358anti-parallel
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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
53 54first strand
Strand 2
E
35 37anti-parallel
Strand 3
E
66 68anti-parallel
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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
169 170first strand
Strand 2
E
160 166anti-parallel
Strand 3
E
176 178anti-parallel
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There are 5 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
169 170first strand
Strand 2
E
160 166anti-parallel
Strand 3
E
150 155anti-parallel
Strand 4
E
297 299parallel
Strand 5
E
329 330parallel
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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
238 241first strand
Strand 2
E
247 250anti-parallel
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