Analysis of interatomic Contacts of Structural Units in PDB entry:
7CCG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7CCG entry

There is 1 chain in PDB entry 7CCG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 4VAL 271
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 7CCG. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
17 30Right-handed alpha
Helix 2
AA2
A
46 55Right-handed alpha
Helix 3
AA3
A
56 61Right-handed alpha
Helix 4
AA4
A
100 107Right-handed alpha
Helix 5
AA5
A
117 121Right-handed 310
Helix 6
AA6
A
129 134Right-handed alpha
Helix 7
AA7
A
134 145Right-handed alpha
Helix 8
AA8
A
147 152Right-handed 310
Helix 9
AA9
A
156 160Right-handed 310
Helix 10
AB1
A
197 199Right-handed 310
Helix 11
AB2
A
226 230Right-handed 310
Helix 12
AB3
A
253 259Right-handed alpha
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There are 3 sheets in PDB entry 7CCG. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
34 37first strand
Strand 2
A
5 10parallel
Strand 3
A
65 70parallel
Strand 4
A
91 95parallel
Strand 5
A
81 86anti-parallel
Strand 6
A
109 114anti-parallel
Strand 7
A
154 155anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
169 170first strand
Strand 2
A
176 183anti-parallel
Strand 3
A
265 270anti-parallel
Strand 4
A
209 214anti-parallel
Strand 5
A
218 222anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
169 170first strand
Strand 2
A
176 183anti-parallel
Strand 3
A
190 195anti-parallel
Strand 4
A
244 249anti-parallel
Strand 5
A
235 239anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il