Analysis of interatomic Contacts of Structural Units in PDB entry:
7CFO


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7CFO entry

There are 4 chains in PDB entry 7CFO (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 264PRO 458
B
 PRO 231PRO 458
C
 PRO 231GLU 456
D
 ILE 268PRO 458
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 54 helices in PDB entry 7CFO. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
265 285Right-handed alpha
Helix 2
AA2
A
288 292Right-handed 310
Helix 3
AA3
A
293 317Right-handed alpha
Helix 4
AA4
A
318 320Right-handed 310
Helix 5
AA5
A
334 340Right-handed alpha
Helix 6
AA6
A
342 353Right-handed alpha
Helix 7
AA7
A
353 360Right-handed alpha
Helix 8
AA8
A
363 376Right-handed alpha
Helix 9
AA9
A
385 408Right-handed alpha
Helix 10
AB1
A
413 420Right-handed alpha
Helix 11
AB2
A
421 435Right-handed alpha
Helix 12
AB3
A
436 442Right-handed alpha
Helix 13
AB4
A
443 456Right-handed alpha
Helix 14
AB5
B
232 241Right-handed alpha
Helix 15
AB6
B
265 285Right-handed alpha
Helix 16
AB7
B
288 292Right-handed 310
Helix 17
AB8
B
293 317Right-handed alpha
Helix 18
AB9
B
318 320Right-handed 310
Helix 19
AC1
B
333 340Right-handed alpha
Helix 20
AC2
B
342 353Right-handed alpha
Helix 21
AC3
B
353 360Right-handed alpha
Helix 22
AC4
B
363 376Right-handed alpha
Helix 23
AC5
B
385 408Right-handed alpha
Helix 24
AC6
B
413 420Right-handed alpha
Helix 25
AC7
B
421 435Right-handed alpha
Helix 26
AC8
B
436 457Right-handed alpha
Helix 27
AC9
C
232 241Right-handed alpha
Helix 28
AD1
C
265 285Right-handed alpha
Helix 29
AD2
C
288 292Right-handed 310
Helix 30
AD3
C
293 317Right-handed alpha
Helix 31
AD4
C
318 320Right-handed 310
Helix 32
AD5
C
327 329Right-handed 310
Helix 33
AD6
C
335 341Right-handed alpha
Helix 34
AD7
C
342 353Right-handed alpha
Helix 35
AD8
C
353 360Right-handed alpha
Helix 36
AD9
C
363 376Right-handed alpha
Helix 37
AE1
C
385 408Right-handed alpha
Helix 38
AE2
C
413 420Right-handed alpha
Helix 39
AE3
C
421 435Right-handed alpha
Helix 40
AE4
C
436 443Right-handed alpha
Helix 41
AE5
C
443 456Right-handed alpha
Helix 42
AE6
D
269 285Right-handed alpha
Helix 43
AE7
D
288 292Right-handed 310
Helix 44
AE8
D
293 317Right-handed alpha
Helix 45
AE9
D
318 320Right-handed 310
Helix 46
AF1
D
334 340Right-handed alpha
Helix 47
AF2
D
342 353Right-handed alpha
Helix 48
AF3
D
353 360Right-handed alpha
Helix 49
AF4
D
363 376Right-handed alpha
Helix 50
AF5
D
385 408Right-handed alpha
Helix 51
AF6
D
413 420Right-handed alpha
Helix 52
AF7
D
421 435Right-handed alpha
Helix 53
AF8
D
436 443Right-handed alpha
Helix 54
AF9
D
443 456Right-handed alpha
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There are 4 sheets in PDB entry 7CFO. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
323 325first strand
Strand 2
A
331 333anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
324 325first strand
Strand 2
B
331 332anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
324 325first strand
Strand 2
C
331 332anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
323 324first strand
Strand 2
D
332 333anti-parallel
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