Analysis of interatomic Contacts of Structural Units in PDB entry:
7CFT

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7CFT entry

There are 6 chains in PDB entry 7CFT (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LEU 48	LEU 465
B	LEU 48	LEU 465
C	LEU 48	LEU 465
D	LEU 1	LYS 57
E	LEU 1	LYS 57
F	LEU 1	LYS 57

There are 51 helices in PDB entry 7CFT. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	49	67	Right-handed alpha
Helix 2	AA2	A	99	103	Right-handed 310
Helix 3	AA3	A	104	111	Right-handed alpha
Helix 4	AA4	A	132	141	Right-handed alpha
Helix 5	AA5	A	153	161	Right-handed alpha
Helix 6	AA6	A	164	169	Right-handed alpha
Helix 7	AA7	A	180	184	Right-handed 310
Helix 8	AA8	A	225	229	Right-handed 310
Helix 9	AA9	A	257	262	Right-handed alpha
Helix 10	AB1	A	306	324	Right-handed alpha
Helix 11	AB2	A	338	345	Right-handed alpha
Helix 12	AB3	A	345	352	Right-handed alpha
Helix 13	AB4	A	386	394	Right-handed alpha
Helix 14	AB5	A	427	429	Right-handed 310
Helix 15	AB6	A	430	440	Right-handed alpha
Helix 16	AB7	A	447	457	Right-handed alpha
Helix 17	AB8	A	457	462	Right-handed alpha
Helix 18	AB9	B	49	67	Right-handed alpha
Helix 19	AC1	B	99	103	Right-handed 310
Helix 20	AC2	B	104	111	Right-handed alpha
Helix 21	AC3	B	132	141	Right-handed alpha
Helix 22	AC4	B	153	161	Right-handed alpha
Helix 23	AC5	B	164	169	Right-handed alpha
Helix 24	AC6	B	180	184	Right-handed 310
Helix 25	AC7	B	225	229	Right-handed 310
Helix 26	AC8	B	257	262	Right-handed alpha
Helix 27	AC9	B	306	324	Right-handed alpha
Helix 28	AD1	B	338	345	Right-handed alpha
Helix 29	AD2	B	345	352	Right-handed alpha
Helix 30	AD3	B	386	394	Right-handed alpha
Helix 31	AD4	B	427	429	Right-handed 310
Helix 32	AD5	B	430	440	Right-handed alpha
Helix 33	AD6	B	447	457	Right-handed alpha
Helix 34	AD7	B	457	462	Right-handed alpha
Helix 35	AD8	C	49	67	Right-handed alpha
Helix 36	AD9	C	99	103	Right-handed 310
Helix 37	AE1	C	104	111	Right-handed alpha
Helix 38	AE2	C	132	141	Right-handed alpha
Helix 39	AE3	C	153	161	Right-handed alpha
Helix 40	AE4	C	164	169	Right-handed alpha
Helix 41	AE5	C	180	184	Right-handed 310
Helix 42	AE6	C	225	229	Right-handed 310
Helix 43	AE7	C	257	262	Right-handed alpha
Helix 44	AE8	C	306	324	Right-handed alpha
Helix 45	AE9	C	338	345	Right-handed alpha
Helix 46	AF1	C	345	352	Right-handed alpha
Helix 47	AF2	C	386	394	Right-handed alpha
Helix 48	AF3	C	427	429	Right-handed 310
Helix 49	AF4	C	430	440	Right-handed alpha
Helix 50	AF5	C	447	457	Right-handed alpha
Helix 51	AF6	C	457	462	Right-handed alpha

There are 18 sheets in PDB entry 7CFT. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	73	77	first strand
Strand 2	A	418	424	anti-parallel
Strand 3	A	269	281	parallel
Strand 4	A	372	375	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	220	222	first strand
Strand 2	A	406	412	anti-parallel
Strand 3	A	269	281	parallel
Strand 4	A	378	380	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	85	86	first strand
Strand 2	A	208	209	anti-parallel

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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	187	189	first strand
Strand 2	A	192	196	anti-parallel
Strand 3	A	89	94	anti-parallel
Strand 4	A	245	250	anti-parallel
Strand 5	A	263	265	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	173	174	first strand
Strand 2	A	177	178	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	73	77	first strand
Strand 2	B	418	424	anti-parallel
Strand 3	B	269	281	parallel
Strand 4	B	372	375	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	220	222	first strand
Strand 2	B	406	412	anti-parallel
Strand 3	B	269	281	parallel
Strand 4	B	378	380	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	85	86	first strand
Strand 2	B	208	209	anti-parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	187	189	first strand
Strand 2	B	192	196	anti-parallel
Strand 3	B	89	94	anti-parallel
Strand 4	B	245	250	anti-parallel
Strand 5	B	263	265	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	173	174	first strand
Strand 2	B	177	178	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	73	77	first strand
Strand 2	C	418	424	anti-parallel
Strand 3	C	269	281	parallel
Strand 4	C	372	375	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	220	222	first strand
Strand 2	C	406	412	anti-parallel
Strand 3	C	269	281	parallel
Strand 4	C	378	380	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	85	86	first strand
Strand 2	C	208	209	anti-parallel

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There are 5 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	187	189	first strand
Strand 2	C	192	196	anti-parallel
Strand 3	C	89	94	anti-parallel
Strand 4	C	245	250	anti-parallel
Strand 5	C	263	265	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	173	174	first strand
Strand 2	C	177	178	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	20	22	first strand
Strand 2	D	34	36	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	20	22	first strand
Strand 2	E	34	36	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	20	22	first strand
Strand 2	F	34	36	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7CFT

Analysis of interatomic Contacts of Structural Units in PDB entry:
7CFT