Analysis of interatomic Contacts of Structural Units in PDB entry:
7CGP


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7CGP entry

There are 15 chains in PDB entry 7CGP (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 22LEU 193
B
 THR 23GLN 415
C
 VAL 21ARG 244
D
 GLN 13LEU 78
E
 GLN 10ASN 75
F
 GLN 13ASN 75
G
 ALA 6GLU 77
H
 ALA 6GLN 75
I
 ALA 10SER 73
J
 ARG 3ALA 85
K
 SER 8ALA 77
L
 ILE 5ALA 82
M
 PRO 3ASP 76
N
 ASP 2MET 74
O
 PRO 3GLU 77
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 56 helices in PDB entry 7CGP. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
24 33Right-handed alpha
Helix 2
AA2
A
59 68Right-handed alpha
Helix 3
AA3
A
68 93Right-handed alpha
Helix 4
AA4
A
120 148Right-handed alpha
Helix 5
AA5
A
151 171Right-handed alpha
Helix 6
AA6
A
171 193Right-handed alpha
Helix 7
AA7
B
24 51Right-handed alpha
Helix 8
AA8
B
76 84Right-handed alpha
Helix 9
AA9
B
84 90Right-handed alpha
Helix 10
AB1
B
102 112Right-handed alpha
Helix 11
AB2
B
124 137Right-handed alpha
Helix 12
AB3
B
143 147Right-handed 310
Helix 13
AB4
B
160 165Right-handed alpha
Helix 14
AB5
B
170 185Right-handed alpha
Helix 15
AB6
B
213 221Right-handed alpha
Helix 16
AB7
B
227 243Right-handed alpha
Helix 17
AB8
B
341 353Right-handed alpha
Helix 18
AB9
B
409 415Right-handed alpha
Helix 19
AC1
C
22 55Right-handed alpha
Helix 20
AC2
C
58 75Right-handed alpha
Helix 21
AC3
C
78 97Right-handed alpha
Helix 22
AC4
C
103 119Right-handed alpha
Helix 23
AC5
C
144 149Right-handed alpha
Helix 24
AC6
C
155 163Right-handed 310
Helix 25
AC7
C
174 179Right-handed alpha
Helix 26
AC8
C
187 191Right-handed 310
Helix 27
AC9
C
193 197Right-handed 310
Helix 28
AD1
C
200 204Right-handed 310
Helix 29
AD2
C
207 215Right-handed alpha
Helix 30
AD3
C
224 244Right-handed alpha
Helix 31
AD4
D
14 32Right-handed alpha
Helix 32
AD5
D
42 76Right-handed alpha
Helix 33
AD6
E
13 30Right-handed alpha
Helix 34
AD7
E
42 75Right-handed alpha
Helix 35
AD8
F
14 33Right-handed alpha
Helix 36
AD9
F
42 75Right-handed alpha
Helix 37
AE1
G
7 33Right-handed alpha
Helix 38
AE2
G
44 75Right-handed alpha
Helix 39
AE3
H
7 34Right-handed alpha
Helix 40
AE4
H
44 75Right-handed alpha
Helix 41
AE5
I
11 34Right-handed alpha
Helix 42
AE6
I
44 49Right-handed alpha
Helix 43
AE7
I
49 73Right-handed alpha
Helix 44
AE8
J
4 31Right-handed alpha
Helix 45
AE9
J
42 85Right-handed alpha
Helix 46
AF1
K
9 32Right-handed alpha
Helix 47
AF2
K
45 77Right-handed alpha
Helix 48
AF3
L
6 33Right-handed alpha
Helix 49
AF4
L
43 82Right-handed alpha
Helix 50
AF5
M
4 34Right-handed alpha
Helix 51
AF6
M
45 75Right-handed alpha
Helix 52
AF7
N
3 34Right-handed alpha
Helix 53
AF8
N
44 59Right-handed alpha
Helix 54
AF9
N
60 73Right-handed alpha
Helix 55
AG1
O
4 34Right-handed alpha
Helix 56
AG2
O
44 77Right-handed alpha
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There are 4 sheets in PDB entry 7CGP. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
95 99first strand
Strand 2
B
63 67parallel
Strand 3
B
119 122parallel
Strand 4
B
149 152parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
202 205first strand
Strand 2
B
188 197anti-parallel
Strand 3
B
395 406anti-parallel
Strand 4
B
370 374anti-parallel
Strand 5
B
248 253anti-parallel
Strand 6
B
305 310anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
367 368first strand
Strand 2
B
331 335anti-parallel
Strand 3
B
312 316anti-parallel
Strand 4
B
208 212anti-parallel
Strand 5
B
384 385anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
125 126first strand
Strand 2
C
131 132anti-parallel
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