Analysis of interatomic Contacts of Structural Units in PDB entry:
7CH7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7CH7 entry

There are 6 chains in PDB entry 7CH7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 13ASN 260
B
 GLY 13ASN 260
C
 VAL 5SER 269
D
 VAL 5SER 269
E
 GLU 3PRO 96
F
 GLU 3PRO 96
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 50 helices in PDB entry 7CH7. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
17 29Right-handed alpha
Helix 2
AA2
A
39 52Right-handed alpha
Helix 3
AA3
A
55 79Right-handed alpha
Helix 4
AA4
A
86 98Right-handed alpha
Helix 5
AA5
A
99 112Right-handed alpha
Helix 6
AA6
A
116 127Right-handed alpha
Helix 7
AA7
A
127 135Right-handed alpha
Helix 8
AA8
A
138 175Right-handed alpha
Helix 9
AA9
A
189 193Right-handed 310
Helix 10
AB1
A
195 224Right-handed alpha
Helix 11
AB2
A
230 259Right-handed alpha
Helix 12
AB3
B
17 29Right-handed alpha
Helix 13
AB4
B
39 52Right-handed alpha
Helix 14
AB5
B
55 79Right-handed alpha
Helix 15
AB6
B
86 98Right-handed alpha
Helix 16
AB7
B
99 112Right-handed alpha
Helix 17
AB8
B
116 127Right-handed alpha
Helix 18
AB9
B
127 135Right-handed alpha
Helix 19
AC1
B
138 175Right-handed alpha
Helix 20
AC2
B
189 193Right-handed 310
Helix 21
AC3
B
195 224Right-handed alpha
Helix 22
AC4
B
230 259Right-handed alpha
Helix 23
AC5
C
46 55Right-handed alpha
Helix 24
AC6
C
78 85Right-handed alpha
Helix 25
AC7
C
101 114Right-handed alpha
Helix 26
AC8
C
117 133Right-handed alpha
Helix 27
AC9
C
134 138Right-handed 310
Helix 28
AD1
C
146 160Right-handed alpha
Helix 29
AD2
C
176 192Right-handed alpha
Helix 30
AD3
C
204 209Right-handed alpha
Helix 31
AD4
C
228 234Right-handed alpha
Helix 32
AD5
C
237 246Right-handed alpha
Helix 33
AD6
D
46 55Right-handed alpha
Helix 34
AD7
D
78 85Right-handed alpha
Helix 35
AD8
D
101 114Right-handed alpha
Helix 36
AD9
D
117 133Right-handed alpha
Helix 37
AE1
D
134 138Right-handed 310
Helix 38
AE2
D
146 160Right-handed alpha
Helix 39
AE3
D
176 192Right-handed alpha
Helix 40
AE4
D
204 209Right-handed alpha
Helix 41
AE5
D
228 234Right-handed alpha
Helix 42
AE6
D
237 246Right-handed alpha
Helix 43
AE7
E
25 30Right-handed alpha
Helix 44
AE8
E
31 36Right-handed alpha
Helix 45
AE9
E
51 66Right-handed alpha
Helix 46
AF1
E
78 88Right-handed alpha
Helix 47
AF2
F
25 30Right-handed alpha
Helix 48
AF3
F
31 36Right-handed alpha
Helix 49
AF4
F
51 66Right-handed alpha
Helix 50
AF5
F
78 88Right-handed alpha
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There are 6 sheets in PDB entry 7CH7. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
27 32first strand
Strand 2
C
7 14anti-parallel
Strand 3
C
65 67anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
90 91first strand
Strand 2
C
167 169parallel
Strand 3
C
199 202parallel
Strand 4
C
37 40parallel
Strand 5
C
215 219parallel
Strand 6
C
222 227anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
27 32first strand
Strand 2
D
7 14anti-parallel
Strand 3
D
65 67anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
90 91first strand
Strand 2
D
167 169parallel
Strand 3
D
199 202parallel
Strand 4
D
37 40parallel
Strand 5
D
215 219parallel
Strand 6
D
222 227anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
5 9first strand
Strand 2
E
13 18anti-parallel
Strand 3
E
41 43parallel
Strand 4
E
74 75parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
5 9first strand
Strand 2
F
13 18anti-parallel
Strand 3
F
41 43parallel
Strand 4
F
74 75parallel
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