Analysis of interatomic Contacts of Structural Units in PDB entry:
7CI1


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7CI1 entry

There are 2 chains in PDB entry 7CI1 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 0ASN 316
B
 SER 0ASN 316
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 29 helices in PDB entry 7CI1. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
2 15Right-handed alpha
Helix 2
AA2
A
17 33Right-handed alpha
Helix 3
AA3
A
40 42Right-handed 310
Helix 4
AA4
A
43 48Right-handed alpha
Helix 5
AA5
A
48 57Right-handed alpha
Helix 6
AA6
A
63 80Right-handed alpha
Helix 7
AA7
A
89 94Right-handed alpha
Helix 8
AA8
A
105 110Right-handed 310
Helix 9
AA9
A
121 124Right-handed 310
Helix 10
AB1
A
181 187Right-handed alpha
Helix 11
AB2
A
197 210Right-handed alpha
Helix 12
AB3
A
211 213Right-handed 310
Helix 13
AB4
A
227 233Right-handed alpha
Helix 14
AB5
A
257 272Right-handed alpha
Helix 15
AB6
B
2 15Right-handed alpha
Helix 16
AB7
B
17 33Right-handed alpha
Helix 17
AB8
B
40 42Right-handed 310
Helix 18
AB9
B
43 48Right-handed alpha
Helix 19
AC1
B
48 57Right-handed alpha
Helix 20
AC2
B
59 62Right-handed 310
Helix 21
AC3
B
63 80Right-handed alpha
Helix 22
AC4
B
89 94Right-handed alpha
Helix 23
AC5
B
104 110Right-handed 310
Helix 24
AC6
B
121 124Right-handed 310
Helix 25
AC7
B
181 188Right-handed alpha
Helix 26
AC8
B
197 210Right-handed alpha
Helix 27
AC9
B
211 213Right-handed 310
Helix 28
AD1
B
227 233Right-handed alpha
Helix 29
AD2
B
257 271Right-handed alpha
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There are 8 sheets in PDB entry 7CI1. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
172 175first strand
Strand 2
A
151 161anti-parallel
Strand 3
A
138 148anti-parallel
Strand 4
A
115 119anti-parallel
Strand 5
A
84 88parallel
Strand 6
A
252 256parallel
Strand 7
A
219 221anti-parallel
Strand 8
A
224 225anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
126 129first strand
Strand 2
A
132 135anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
286 288first strand
Strand 2
A
313 315anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
291 296first strand
Strand 2
A
305 310anti-parallel
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There are 8 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
172 175first strand
Strand 2
B
151 161anti-parallel
Strand 3
B
138 148anti-parallel
Strand 4
B
115 119anti-parallel
Strand 5
B
84 88parallel
Strand 6
B
252 256parallel
Strand 7
B
219 221anti-parallel
Strand 8
B
224 225anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
126 129first strand
Strand 2
B
132 135anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
286 288first strand
Strand 2
B
313 315anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
291 296first strand
Strand 2
B
305 310anti-parallel
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