Analysis of interatomic Contacts of Structural Units in PDB entry:
7CI2


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7CI2 entry

There are 4 chains in PDB entry 7CI2 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 0ASN 316
B
 SER 0ASN 316
C
 TYR 618VAL 636
D
 TYR 618VAL 636
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 26 helices in PDB entry 7CI2. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
2 15Right-handed alpha
Helix 2
AA2
A
17 33Right-handed alpha
Helix 3
AA3
A
43 48Right-handed alpha
Helix 4
AA4
A
48 56Right-handed alpha
Helix 5
AA5
A
63 80Right-handed alpha
Helix 6
AA6
A
89 94Right-handed alpha
Helix 7
AA7
A
104 110Right-handed 310
Helix 8
AA8
A
121 123Right-handed 310
Helix 9
AA9
A
181 187Right-handed alpha
Helix 10
AB1
A
196 210Right-handed alpha
Helix 11
AB2
A
211 214Right-handed 310
Helix 12
AB3
A
227 232Right-handed alpha
Helix 13
AB4
A
257 278Right-handed alpha
Helix 14
AB5
B
2 15Right-handed alpha
Helix 15
AB6
B
17 33Right-handed alpha
Helix 16
AB7
B
40 47Right-handed 310
Helix 17
AB8
B
48 56Right-handed alpha
Helix 18
AB9
B
63 80Right-handed alpha
Helix 19
AC1
B
89 94Right-handed alpha
Helix 20
AC2
B
105 110Right-handed 310
Helix 21
AC3
B
121 123Right-handed 310
Helix 22
AC4
B
181 187Right-handed alpha
Helix 23
AC5
B
196 210Right-handed alpha
Helix 24
AC6
B
211 214Right-handed 310
Helix 25
AC7
B
227 232Right-handed alpha
Helix 26
AC8
B
257 278Right-handed alpha
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There are 10 sheets in PDB entry 7CI2. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
172 175first strand
Strand 2
A
151 161anti-parallel
Strand 3
A
138 148anti-parallel
Strand 4
A
115 119anti-parallel
Strand 5
A
84 88parallel
Strand 6
A
252 256parallel
Strand 7
A
219 221anti-parallel
Strand 8
A
224 226anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
132 135first strand
Strand 2
A
125 129anti-parallel
Strand 3
C
624 627parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
237 238first strand
Strand 2
A
245 246anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
286 288first strand
Strand 2
A
313 315anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
291 295first strand
Strand 2
A
306 310anti-parallel
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There are 8 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
172 175first strand
Strand 2
B
151 161anti-parallel
Strand 3
B
138 148anti-parallel
Strand 4
B
115 119anti-parallel
Strand 5
B
84 88parallel
Strand 6
B
252 256parallel
Strand 7
B
219 221anti-parallel
Strand 8
B
224 225anti-parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
132 135first strand
Strand 2
B
125 129anti-parallel
Strand 3
D
624 627parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
237 238first strand
Strand 2
B
245 246anti-parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
286 288first strand
Strand 2
B
313 315anti-parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
291 295first strand
Strand 2
B
306 310anti-parallel
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