Analysis of interatomic Contacts of Structural Units in PDB entry:
7CIU


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7CIU entry

There are 2 chains in PDB entry 7CIU (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 7LEU 216
B
 ASP 8LEU 216
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 7CIU. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
18 30Right-handed alpha
Helix 2
AA2
A
34 39Right-handed alpha
Helix 3
AA3
A
46 55Right-handed alpha
Helix 4
AA4
A
56 60Right-handed 310
Helix 5
AA5
A
83 96Right-handed alpha
Helix 6
AA6
A
98 115Right-handed alpha
Helix 7
AA7
A
115 120Right-handed alpha
Helix 8
AA8
A
141 158Right-handed alpha
Helix 9
AA9
A
168 178Right-handed alpha
Helix 10
AB1
A
189 191Right-handed 310
Helix 11
AB2
B
19 30Right-handed alpha
Helix 12
AB3
B
34 39Right-handed alpha
Helix 13
AB4
B
46 55Right-handed alpha
Helix 14
AB5
B
56 60Right-handed 310
Helix 15
AB6
B
83 95Right-handed alpha
Helix 16
AB7
B
98 115Right-handed alpha
Helix 17
AB8
B
115 120Right-handed alpha
Helix 18
AB9
B
141 158Right-handed alpha
Helix 19
AC1
B
168 178Right-handed alpha
Helix 20
AC2
B
189 191Right-handed 310
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There are 2 sheets in PDB entry 7CIU. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
10 13first strand
Strand 2
A
63 67anti-parallel
Strand 3
A
70 80anti-parallel
Strand 4
A
125 133anti-parallel
Strand 5
A
161 166parallel
Strand 6
A
208 215anti-parallel
Strand 7
A
181 187anti-parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
10 13first strand
Strand 2
B
63 67anti-parallel
Strand 3
B
70 81anti-parallel
Strand 4
B
124 133anti-parallel
Strand 5
B
161 166parallel
Strand 6
B
208 215anti-parallel
Strand 7
B
181 187anti-parallel
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