Analysis of interatomic Contacts of Structural Units in PDB entry:
7CIZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7CIZ entry

There are 12 chains in PDB entry 7CIZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 57ARG 134
B
 ARG 23TYR 98
C
 ASP 68GLY 125
E
 THR 58ALA 135
F
 VAL 21TYR 98
G
 PRO 62GLY 125
I
 THR 58ALA 135
J
 VAL 21TYR 98
K
 LEU 63GLY 125
D
 GLY 212SER 246
H
 GLY 212LYS 244
L
 GLY 212SER 246
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 31 helices in PDB entry 7CIZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
63 77Right-handed alpha
Helix 2
AA2
A
85 114Right-handed alpha
Helix 3
AA3
A
120 131Right-handed alpha
Helix 4
AA4
B
24 29Right-handed 310
Helix 5
AA5
B
30 41Right-handed alpha
Helix 6
AA6
B
49 76Right-handed alpha
Helix 7
AA7
B
82 97Right-handed alpha
Helix 8
AA8
C
76 82Right-handed 310
Helix 9
AA9
C
106 125Right-handed alpha
Helix 10
AB1
E
63 76Right-handed alpha
Helix 11
AB2
E
85 114Right-handed alpha
Helix 12
AB3
E
120 131Right-handed alpha
Helix 13
AB4
F
24 29Right-handed 310
Helix 14
AB5
F
30 41Right-handed alpha
Helix 15
AB6
F
49 76Right-handed alpha
Helix 16
AB7
F
82 97Right-handed alpha
Helix 17
AB8
G
76 82Right-handed 310
Helix 18
AB9
G
106 125Right-handed alpha
Helix 19
AC1
I
63 77Right-handed alpha
Helix 20
AC2
I
85 114Right-handed alpha
Helix 21
AC3
I
120 132Right-handed alpha
Helix 22
AC4
J
24 29Right-handed 310
Helix 23
AC5
J
30 41Right-handed alpha
Helix 24
AC6
J
49 76Right-handed alpha
Helix 25
AC7
J
82 95Right-handed alpha
Helix 26
AC8
K
76 82Right-handed 310
Helix 27
AC9
K
84 88Right-handed 310
Helix 28
AD1
K
106 125Right-handed alpha
Helix 29
AD2
D
213 243Right-handed alpha
Helix 30
AD3
H
213 243Right-handed alpha
Helix 31
AD4
L
213 243Right-handed alpha
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There are 6 sheets in PDB entry 7CIZ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
83 84first strand
Strand 2
B
80 81parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
118 119first strand
Strand 2
B
45 46parallel
Strand 3
C
70 71anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
83 84first strand
Strand 2
F
80 81parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
118 119first strand
Strand 2
F
45 47parallel
Strand 3
G
69 71anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
I
83 84first strand
Strand 2
J
80 81parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
I
118 119first strand
Strand 2
J
45 47parallel
Strand 3
K
69 71anti-parallel
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