Analysis of interatomic Contacts of Structural Units in PDB entry:
7CJR


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7CJR entry

There is 1 chain in PDB entry 7CJR (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 23ASP 239
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 7CJR. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
24 35Right-handed alpha
Helix 2
AA2
A
47 54Right-handed alpha
Helix 3
AA3
A
55 59Right-handed 310
Helix 4
AA4
A
60 65Right-handed 310
Helix 5
AA5
A
72 86Right-handed alpha
Helix 6
AA6
A
96 109Right-handed alpha
Helix 7
AA7
A
113 120Right-handed alpha
Helix 8
AA8
A
129 138Right-handed alpha
Helix 9
AA9
A
141 146Right-handed alpha
Helix 10
AB1
A
147 149Right-handed 310
Helix 11
AB2
A
150 154Right-handed 310
Helix 12
AB3
A
161 168Right-handed alpha
Helix 13
AB4
A
170 180Right-handed alpha
Helix 14
AB5
A
202 214Right-handed alpha
Helix 15
AB6
A
221 223Right-handed 310
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There are 2 sheets in PDB entry 7CJR. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
43 46first strand
Strand 2
A
197 201anti-parallel
Strand 3
A
189 194anti-parallel
Strand 4
A
183 186anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
215 219first strand
Strand 2
A
233 237anti-parallel
Strand 3
A
229 230anti-parallel
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